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SCNpilot_cont_1000_p_scaffold_3280

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3280_1
unknown

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comp(1..219)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3280_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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419..2092
DNA (1674bp) protein (558aa)
FAD dependent oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139Z4_RHOPS
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABE39095.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_1000_p_scaffold_3280_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2124..3293
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase domain-containing protein; K11731 citronellyl-CoA dehydrogenase [EC:1.3.99.-]
Acyl-CoA dehydrogenase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138Q5_RHOPS
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:ABE39434.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_1000_p_scaffold_3280_4
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3513..4202
DNA (690bp) protein (230aa)
Protein ydeP n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S312_9PROT
Putative formate dehydrogenase oxidoreductase protein {ECO:0000313|EMBL:KGB22750.1}; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis.;"
formate dehydrogenase subunit alpha
SCNpilot_cont_1000_p_scaffold_3280_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4148..4330
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030DB739
ATP-dependent Clp protease subunit {ECO:0000313|EMBL:ERF80066.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3280_6
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4416..5324
DNA (909bp) protein (303aa)
DnaJ-class molecular chaperone CbpA n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QRH1_9BRAD
Molecular chaperone DnaJ {ECO:0000313|EMBL:KEA08341.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
dnaJ; DNAJ molecular chaperone protein rbh
SCNpilot_cont_1000_p_scaffold_3280_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5321..5614
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F7BB1F
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49550.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3280_8
unknown

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5654..5749
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3280_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5838..8603)
DNA (2766bp) protein (922aa)
malto-oligosyltrehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] rbh
Malto-oligosyltrehalose synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IDI6_9BRAD rbh
Malto-oligosyltrehalose synthase {ECO:0000313|EMBL:ERF80464.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_1000_p_scaffold_3280_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8604..10367)
DNA (1764bp) protein (588aa)
malto-oligosyltrehalose trehalohydrolase; K01236 maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] rbh
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKT3_RHOPX rbh
SCNpilot_cont_1000_p_scaffold_3280_11
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10513..10683
DNA (171bp) protein (57aa)
Putative oxidoreductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G178_9BRAD
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAL74515.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_1000_p_scaffold_3280_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10756..11205)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035FEAD6
Acetolactate synthase I/II/III large subunit {ECO:0000313|EMBL:ERF84294.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
Displaying 12 items

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