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SCNpilot_cont_1000_p_scaffold_3663

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3663_1
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..437
DNA (435bp) protein (145aa)
UPI0003CF56AF related cluster n=1 Tax=unknown RepID=UPI0003CF56AF
Nin-like protein {ECO:0000313|EMBL:KAI93283.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3663_2
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

434..937
DNA (504bp) protein (168aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
folA; dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74FN5_GEOSL
SCNpilot_cont_1000_p_scaffold_3663_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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931..1131
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4C7AF
DNA, contig: SP610 {ECO:0000313|EMBL:GAN12438.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_1000_p_scaffold_3663_4
unknown

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comp(1140..1778)
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3663_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1884..3269)
DNA (1386bp) protein (462aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
RNA-splicing ligase RtcB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6Y7_9RHIZ
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3663_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3569..5161
DNA (1593bp) protein (531aa)
Sigma-54 interacting transcription regulator protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6Y9_9RHIZ
Sigma-54 interacting transcription regulator protein {ECO:0000313|EMBL:EHH12549.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
sigma-54 interacting transcription regulator protein; K14414 transcriptional regulatory protein RtcR
SCNpilot_cont_1000_p_scaffold_3663_7
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5189..5803)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K544_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31784.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3663_8
unknown

Not on your lists

comp(5803..6618)
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3663_9
unknown

Not on your lists

comp(6611..6901)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3663_10
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6903..9212)
DNA (2310bp) protein (770aa)
Putative penicillin-binding protein 1A n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B4Q9_METEA rbh
putative penicillin-binding protein 1A rbh
Putative penicillin-binding protein 1A {ECO:0000313|EMBL:ACS43441.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_1000_p_scaffold_3663_11
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9209..9805)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=C5B4R0_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS43442.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_1000_p_scaffold_3663_12
unknown

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9967..10308
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3663_13
unknown

Not on your lists

comp(10431..10733)
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 13 items

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