ggKbase home page

SCNpilot_cont_1000_p_scaffold_3786

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3786_1
Gallus gallus, Gallus, Galliformes, Aves, Chordata, Metazoa

Not on your lists

1..1776
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Gallus gallus RepID=F1NCY9_CHICK
GPATCH3, GPATC3; G patch domain containing 3
Uncharacterized protein {ECO:0000313|Ensembl:ENSGALP00000001293}; TaxID=9031 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus.;" source="Gallus gallus (Chicken).;"
SCNpilot_cont_1000_p_scaffold_3786_2
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1773..3449
DNA (1677bp) protein (559aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8WHG8_STRFA
Tetratricopeptide TPR_1 repeat-containing protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADW08052.1}; TaxID=591167 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATCC 33331 / IAF-45CD).;"
SCNpilot_cont_1000_p_scaffold_3786_3
unknown

Not on your lists

3453..3593
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_4
unknown

Not on your lists

comp(3601..3855)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_5
unknown

Not on your lists

4121..4603
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_6
Malassezia globosa, Malassezia, Malasseziales, Malasseziomycetes, Basidiomycota, Fungi

Not on your lists

comp(4637..4939)
DNA (303bp) protein (101aa)
hypothetical protein; K15710 E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19]
Putative uncharacterized protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) RepID=A8PW14_MALGO
Uncharacterized protein {ECO:0000313|EMBL:EDP44522.1}; TaxID=425265 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia.;" source="Malassezia globosa (strain ATCC MYA-4612 / CBS 7966); (Dandruff-associated fungus).;"
SCNpilot_cont_1000_p_scaffold_3786_7
unknown

Not on your lists

comp(4936..5277)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_8
unknown

Not on your lists

comp(5274..6284)
DNA (1011bp) protein (337aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_9
unknown

Not on your lists

comp(6794..7399)
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_10
unknown

Not on your lists

comp(7427..7864)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_11
Theobroma cacao, Theobroma, Malvales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(7840..8733)
DNA (894bp) protein (298aa)
helicase-like protein; K15710 E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19]
UPI0003D25DF6 related cluster n=1 Tax=unknown RepID=UPI0003D25DF6
Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid binding isoform 2 {ECO:0000313|EMBL:EOY20188.1}; TaxID=3641 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.;" source="Theobroma cacao (Cacao) (Cocoa).;"
SCNpilot_cont_1000_p_scaffold_3786_12
Capronia semiimmersa, Capronia, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(9009..10310)
DNA (1302bp) protein (434aa)
hypothetical protein; K15710 E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19]
Putative uncharacterized protein n=1 Tax=Pyrenophora teres f. teres (strain 0-1) RepID=E3RY67_PYRTT
Capronia semiimmersa strain CBS 27337 unplaced genomic scaffold supercont1.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIW72103.1}; TaxID=5601 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Capronia.;" source="Capronia semiimmersa.;"
SCNpilot_cont_1000_p_scaffold_3786_13
unknown

Not on your lists

10372..10488
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_14
unknown

Not on your lists

10628..10969
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_15
unknown

Not on your lists

10979..11146
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_16
unknown

Not on your lists

comp(11180..11515)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_17
unknown

Not on your lists

11782..12036
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_18
Caenorhabditis japonica, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

12046..14133
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2VX18_CAEJA
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:CJA06863}; TaxID=281687 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis japonica.;"
Hypothetical protein CBG09238
SCNpilot_cont_1000_p_scaffold_3786_19
unknown

Not on your lists

14118..14522
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_20
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

comp(14329..15423)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZUH4_BRAFL
GF12744 gene product from transcript GF12744-RA
Putative uncharacterized protein {ECO:0000313|EMBL:EEN43813.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_cont_1000_p_scaffold_3786_21
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15420..15977)
DNA (558bp) protein (186aa)
Sel1 repeat protein n=1 Tax=Kingella denitrificans ATCC 33394 RepID=F0F1U5_9NEIS
Sel1 domain-containing protein; K07126
Sel1 repeat protein {ECO:0000313|EMBL:EGC16486.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
SCNpilot_cont_1000_p_scaffold_3786_22
unknown

Not on your lists

comp(16078..16263)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_23
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16263..16808)
DNA (546bp) protein (182aa)
Sel1 repeat protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZEI2_9GAMM
Sel1 repeat protein {ECO:0000313|EMBL:EHM54575.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium valvarum F0432.;"
Sel1 domain-containing protein; K07126
SCNpilot_cont_1000_p_scaffold_3786_24
unknown

Not on your lists

17010..17192
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_25
unknown

Not on your lists

17189..17419
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3786_26
unknown

Not on your lists

17863..17940
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 26 items

View Taxonomy