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SCNpilot_cont_1000_p_scaffold_1008

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1008_1
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2003
DNA (2001bp) protein (667aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDP1_9GAMM rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KGM56793.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
nucleoside-diphosphate-sugar epimerase rbh
SCNpilot_cont_1000_p_scaffold_1008_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2130..2462
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90336.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1008_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2501..4840
DNA (2340bp) protein (780aa)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase {ECO:0000313|EMBL:CCU62526.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CCU62526.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CCU62526.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
copper-translocating P-type ATPase (EC:3.6.3.4)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW6_9PROT
SCNpilot_cont_1000_p_scaffold_1008_4
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4898..6877
DNA (1980bp) protein (660aa)
Multicopper oxidase type 1 n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XJ1_NITEU
pcoA; multicopper oxidase type 1
Multicopper oxidase type 1 {ECO:0000313|EMBL:CAD84190.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCNpilot_cont_1000_p_scaffold_1008_5
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6874..7710
DNA (837bp) protein (279aa)
Possible copper resistance protein B n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XJ0_NITEU rbh
pcoB; copper resistance protein B; K07233 copper resistance protein B rbh
Possible copper resistance protein B {ECO:0000313|EMBL:CAD84191.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCNpilot_cont_1000_p_scaffold_1008_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7839..8702)
DNA (864bp) protein (288aa)
Carbonic anhydrase {ECO:0000313|EMBL:CCU61406.1}; EC=4.2.1.1 {ECO:0000313|EMBL:CCU61406.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
carbonate dehydratase (EC:4.2.1.1); K01674 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF47_9PROT
SCNpilot_cont_1000_p_scaffold_1008_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9045..10544
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9W6_PHEZH rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_1000_p_scaffold_1008_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10996..12774
DNA (1779bp) protein (593aa)
Type I secretion system ATPase, PrtD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9I8_NITMU rbh
Peptidase {ECO:0000313|EMBL:KIO48605.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Type I secretion system ATPase PrtD; K12536 ATP-binding cassette, subfamily C, bacterial exporter for protease/lipase rbh
SCNpilot_cont_1000_p_scaffold_1008_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12752..14116
DNA (1365bp) protein (455aa)
Type I secretion membrane fusion protein, HlyD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9I7_NITMU rbh
Hemolysin D {ECO:0000313|EMBL:KIO48637.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Type I secretion membrane fusion protein HlyD; K12537 protease secretion protein HasE rbh
SCNpilot_cont_1000_p_scaffold_1008_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14776..15135
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48666.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_1008_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15312..15686
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKE6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48678.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1008_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15859..17295
DNA (1437bp) protein (479aa)
Heavy metal RND efflux outer membrane protein,CzcC family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVH1_9PROT rbh
Heavy metal RND efflux outer membrane protein,CzcC family {ECO:0000313|EMBL:CCU63325.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
SCNpilot_cont_1000_p_scaffold_1008_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17292..18887
DNA (1596bp) protein (532aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIY1_9PROT rbh
Hemolysin D {ECO:0000313|EMBL:KIO48668.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
SCNpilot_cont_1000_p_scaffold_1008_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18927..22178
DNA (3252bp) protein (1084aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD03_9PROT rbh
Cation transporter {ECO:0000313|EMBL:KIO48669.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
SCNpilot_cont_1000_p_scaffold_1008_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22159..23007
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035C44EB
Co/Zn/Cd efflux system component rbh
Co/Zn/Cd efflux system component {ECO:0000313|EMBL:ABC82913.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
SCNpilot_cont_1000_p_scaffold_1008_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23144..25468
DNA (2325bp) protein (775aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
Metal ABC transporter ATPase {ECO:0000313|EMBL:KIO48670.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
SCNpilot_cont_1000_p_scaffold_1008_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25535..26677
DNA (1143bp) protein (381aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUS8_9PROT
Cation transporter {ECO:0000313|EMBL:KIO48671.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_cont_1000_p_scaffold_1008_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26746..27129
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48666.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_1008_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27520..27897
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKE6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48709.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1008_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28147..28920
DNA (774bp) protein (258aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956, ECO:0000313|EMBL:KIO48675.1}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Carbonic anhydrase n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD01_9PROT
SCNpilot_cont_1000_p_scaffold_1008_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28962..29288
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48674.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_1008_22
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29461..29940
DNA (480bp) protein (160aa)
Proline-rich region n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TCZ0_9PROT
proline-rich region
Proline-rich region {ECO:0000313|EMBL:ADZ28038.1}; Flags: Precursor;; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_cont_1000_p_scaffold_1008_23

Not on your lists

30077..30802
DNA (726bp) protein (242aa)
Putative membrane transporter n=1 Tax=uncultured bacterium RepID=I6Z9R0_9BACT rbh
Putative membrane transporter {ECO:0000313|EMBL:AFN66352.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K07238 zinc transporter, ZIP family
Displaying 23 items

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