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SCNpilot_cont_1000_p_scaffold_1044

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1044_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..499)
DNA (498bp) protein (166aa)
Major facilitator transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX4_9GAMM
Major facilitator transporter {ECO:0000313|EMBL:EIL86815.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MFS transporter
SCNpilot_cont_1000_p_scaffold_1044_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(536..1234)
DNA (699bp) protein (233aa)
Putative cytochrome c biogenesis protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX3_9GAMM
Cytochrome C biogenesis transmembrane region family protein {ECO:0000313|EMBL:AJZ56257.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_1000_p_scaffold_1044_3
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1318..1590)
DNA (273bp) protein (91aa)
Thioredoxin/glutaredoxin n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX2_9GAMM
Glutaredoxin family protein {ECO:0000313|EMBL:AJZ56031.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
thioredoxin/glutaredoxin
SCNpilot_cont_1000_p_scaffold_1044_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1606..2157)
DNA (552bp) protein (184aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX1_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:EIL86812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative MerR family regulatory protein
SCNpilot_cont_1000_p_scaffold_1044_5
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2247..2474)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX0_9GAMM
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AJZ56452.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCNpilot_cont_1000_p_scaffold_1044_6
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2559..5015)
DNA (2457bp) protein (819aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AJZ56232.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AJZ56232.1};; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
copA; copper-transporting ATPase CopA (EC:3.6.3.4)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW9_9GAMM rbh
SCNpilot_cont_1000_p_scaffold_1044_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5250..5678)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y6_ALIDK
MerR family transcriptional regulator
Tax=CG_Rhodocyc_01
SCNpilot_cont_1000_p_scaffold_1044_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5749..6099
DNA (351bp) protein (117aa)
Mercuric transport protein n=10 Tax=Proteobacteria RepID=MERT_ALCSP
putative mercuric transport protein
Mercuric transport protein {ECO:0000313|EMBL:AIX66999.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
SCNpilot_cont_1000_p_scaffold_1044_9
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6113..6388
DNA (276bp) protein (92aa)
Mercury scavenger protein:Heavy-metal-associated domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820P0_NITEU
merP; mercury scavenger protein; K08364 periplasmic mercuric ion binding protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCNpilot_cont_1000_p_scaffold_1044_10
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6417..6842
DNA (426bp) protein (142aa)
Putative mercury transport protein MerC n=1 Tax=Burkholderia sp. TJI49 RepID=F0FY39_9BURK
Putative mercury transport protein MerC {ECO:0000313|EMBL:EGD05860.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
merC; mercuric ion transport protein
SCNpilot_cont_1000_p_scaffold_1044_11

Not on your lists

6884..8569
DNA (1686bp) protein (562aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] rbh
Mercuric ion reductase n=2 Tax=Bacteria RepID=M3DUM0_STEMA rbh
SCNpilot_cont_1000_p_scaffold_1044_12
Acinetobacter calcoaceticus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8587..8952
DNA (366bp) protein (122aa)
transcriptional regulator n=1 Tax=Methyloversatilis universalis RepID=UPI00037E0DD9
merD; transcriptional regulator MerD
MerD protein {ECO:0000313|EMBL:CAB65943.1}; TaxID=471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter calcoaceticus.;"
SCNpilot_cont_1000_p_scaffold_1044_13
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8949..9185
DNA (237bp) protein (79aa)
MerE n=15 Tax=Enterobacteriaceae RepID=C4NV40_ECOLX
merE; mercury resistance protein
MerE {ECO:0000313|EMBL:ACQ77929.1}; Mercury resistance protein {ECO:0000313|EMBL:AIO10056.1}; TaxID=28901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella choleraesuis.;"
SCNpilot_cont_1000_p_scaffold_1044_14
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9311..10081
DNA (771bp) protein (257aa)
Transposase n=1 Tax=uncultured bacterium RepID=Q8RSK8_9BACT
TnpA protein {ECO:0000313|EMBL:AJM90350.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
Tn3 family transposase
SCNpilot_cont_1000_p_scaffold_1044_15
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9931..11907)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1044_16
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11904..12425)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CHC3_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT71031.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
SCNpilot_cont_1000_p_scaffold_1044_17
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12422..12982)
DNA (561bp) protein (187aa)
Putative conjugal transfer TRAF transmembrane protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX7_POLNA rbh
putative conjugal transfer TRAF transmembrane protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1044_18
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12979..13533)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX6_POLNA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM39454.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_1000_p_scaffold_1044_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13530..13781)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY2_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1044_20
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13778..14416)
DNA (639bp) protein (213aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX4_POLNA rbh
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABM39452.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_1000_p_scaffold_1044_21
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14700..15518)
DNA (819bp) protein (273aa)
Conserved hypothetical replication initiator and transcription repressor protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX3_POLNA rbh
putative replication initiator and transcription repressor protein rbh
Conserved hypothetical replication initiator and transcription repressor protein {ECO:0000313|EMBL:ABM39451.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_1000_p_scaffold_1044_22
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15587..15883)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX2_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39450.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_1000_p_scaffold_1044_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15967..16764)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX1_POLNA rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1044_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17123..17473)
DNA (351bp) protein (117aa)
Putative lipoprotein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX0_POLNA
putative lipoprotein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1044_25
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17925..18215
DNA (291bp) protein (97aa)
Transcriptional regulator, XRE family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUW9_POLNA
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABM39447.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_1000_p_scaffold_1044_26
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18258..18770)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUW8_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39446.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_1000_p_scaffold_1044_27
unknown

Not on your lists

comp(18783..19307)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1044_28
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19330..21357)
DNA (2028bp) protein (676aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2FKL4_9BACT rbh
nuclease; K03497 chromosome partitioning protein, ParB family rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1044_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21443..22270)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUW5_POLNA rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1044_30
unknown

Not on your lists

comp(22643..22903)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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