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SCNpilot_cont_1000_p_scaffold_1242

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1242_1
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
Copper-resistance protein, CopA family {ECO:0000313|EMBL:EFF76937.1}; EC=1.10.3.2 {ECO:0000313|EMBL:EFF76937.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Copper oxidase n=1 Tax=Pseudomonas aeruginosa VRFPA07 RepID=V8EY43_PSEAI
CopA family copper resistance protein
SCNpilot_cont_1000_p_scaffold_1242_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

463..1155
DNA (693bp) protein (231aa)
Two component response regulator n=46 Tax=Proteobacteria RepID=I3TV35_TISMK rbh
irlR2; transcriptional activator protein IrlR 2; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR rbh
Transcriptional activator protein CopR {ECO:0000313|EMBL:EJP76707.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_1000_p_scaffold_1242_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1127..2563
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Heavy metal sensor histidine kinase n=17 Tax=Proteobacteria RepID=J4J6Y0_9BURK rbh
sensor kinase CusS rbh
SCNpilot_cont_1000_p_scaffold_1242_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2732..3127
DNA (396bp) protein (132aa)
Transposase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8A7_9BURK
transposase IS3/IS911 family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_cont_1000_p_scaffold_1242_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3124..3456
DNA (333bp) protein (111aa)
IS66 family element, Orf2 protein n=9 Tax=Proteobacteria RepID=D4X8A6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EPD42624.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
is66 orf2 family protein
SCNpilot_cont_1000_p_scaffold_1242_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3575..5083
DNA (1509bp) protein (503aa)
Transposase n=3 Tax=Pseudomonas aeruginosa RepID=K1DP70_PSEAI rbh
transposase is66
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1242_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5106..5525)
DNA (420bp) protein (140aa)
Cd(II)/Pb(II)-responsive transcriptional regulator n=7 Tax=Proteobacteria RepID=N2D1Q5_PSEAI
MerR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1242_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5722..6681
DNA (960bp) protein (320aa)
Uncharacterized protein n=8 Tax=Proteobacteria RepID=N2D7C0_PSEAI rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_1242_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7272..7598
DNA (327bp) protein (109aa)
Uncharacterized protein n=26 Tax=Proteobacteria RepID=I4MT22_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CEI21691.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1242_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7617..7916
DNA (300bp) protein (100aa)
Uncharacterized protein n=30 Tax=Proteobacteria RepID=I4MT21_9BURK
Heavy metal transporter {ECO:0000313|EMBL:AKE69132.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Heavy metal transport/detoxification protein
SCNpilot_cont_1000_p_scaffold_1242_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7925..9592
DNA (1668bp) protein (556aa)
Uncharacterized protein n=21 Tax=Proteobacteria RepID=I4MT20_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK92360.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1242_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9888..11021
DNA (1134bp) protein (378aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1] rbh
Acetate kinase n=9 Tax=Pseudomonas aeruginosa RepID=E2ZUP7_PSEAI rbh
SCNpilot_cont_1000_p_scaffold_1242_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11239..11691
DNA (453bp) protein (151aa)
MerR family transcriptional regulator n=11 Tax=Proteobacteria RepID=I4MT18_9BURK
MerR family transcriptional regulator {ECO:0000313|EMBL:EIK92358.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
MerR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1242_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11846..13162
DNA (1317bp) protein (439aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] rbh
Cyclopropane-fatty-acyl-phospholipid synthase n=21 Tax=Proteobacteria RepID=J4YAL8_9BURK rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AKE69136.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_cont_1000_p_scaffold_1242_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13280..15709
DNA (2430bp) protein (810aa)
D-xylulose 5-phosphate d-fructose 6-phosphate phosphoketolase {ECO:0000313|EMBL:EIK92356.1}; EC=4.1.2.- {ECO:0000313|EMBL:EIK92356.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
D-xylulose 5-phosphate d-fructose 6-phosphate phosphoketolase n=9 Tax=Proteobacteria RepID=I4MT16_9BURK rbh
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase rbh
SCNpilot_cont_1000_p_scaffold_1242_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15887..16489)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=8 Tax=Proteobacteria RepID=I4MT15_9BURK rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEI21685.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1242_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16595..17425
DNA (831bp) protein (277aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=I4MT14_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:CEI21684.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SDR-family protein rbh
SCNpilot_cont_1000_p_scaffold_1242_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17434..18696)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=K0HVR5_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU44912.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_cont_1000_p_scaffold_1242_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18693..19748)
DNA (1056bp) protein (352aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:CEI21682.1}; EC=1.2.1.59 {ECO:0000313|EMBL:CEI21682.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59) rbh
Glyceraldehyde-3-phosphate dehydrogenase n=6 Tax=Proteobacteria RepID=I4MT12_9BURK rbh
SCNpilot_cont_1000_p_scaffold_1242_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19776..21398)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=N2CTB7_PSEAI rbh
ABC transporter {ECO:0000313|EMBL:AFU44914.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
ABC transporter rbh
SCNpilot_cont_1000_p_scaffold_1242_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21395..22426)
DNA (1032bp) protein (344aa)
Phosphoglycerate dehydrogenase n=7 Tax=Proteobacteria RepID=K0HYN1_9BURK rbh
phosphoglycerate dehydrogenase rbh
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AFU44915.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_cont_1000_p_scaffold_1242_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22423..22677)
DNA (255bp) protein (85aa)
Type 11 methyltransferase n=10 Tax=Proteobacteria RepID=K0I7G8_9BURK
type 11 methyltransferase
Type 11 methyltransferase {ECO:0000313|EMBL:AFU44916.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_cont_1000_p_scaffold_1242_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22674..23318)
DNA (645bp) protein (215aa)
Uncharacterized protein n=11 Tax=Proteobacteria RepID=I4MT08_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK92348.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1242_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23372..24271)
DNA (900bp) protein (300aa)
phosphoribosylpyrophosphate synthetase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase n=8 Tax=Proteobacteria RepID=I4MT07_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU96960.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
SCNpilot_cont_1000_p_scaffold_1242_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24268..25788)
DNA (1521bp) protein (507aa)
thymidine phosphorylase (EC:2.4.2.4) rbh
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Putative thymidine phosphorylase n=6 Tax=Proteobacteria RepID=D4X8A3_9BURK rbh
Displaying 25 items

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