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SCNpilot_cont_1000_p_scaffold_8467

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_8467_1
unknown

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2..199
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_8467_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(423..743)
DNA (321bp) protein (107aa)
partition protein C n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037B766B
Partition protein C {ECO:0000313|EMBL:KIO48653.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
partition protein C
SCNpilot_cont_1000_p_scaffold_8467_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(902..1225)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X743_THIK1
Uncharacterized protein {ECO:0000313|EMBL:KIO48652.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_8467_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1222..1848)
DNA (627bp) protein (209aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X742_THIK1
Partition protein {ECO:0000313|EMBL:KIO48651.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
SCNpilot_cont_1000_p_scaffold_8467_5
unknown

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comp(2265..2525)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_8467_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2575..3543
DNA (969bp) protein (323aa)
Type II secretion system protein E n=1 Tax=Ralstonia solanacearum SD54 RepID=V5CHM1_RALSL
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KIO48650.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
SCNpilot_cont_1000_p_scaffold_8467_7
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3544..3879
DNA (336bp) protein (112aa)
Conjugal transfer protein n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9PBT4_XYLFA
conjugal transfer protein; K03197 type IV secretion system protein VirB2
Conjugal transfer protein {ECO:0000313|EMBL:AAF84855.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
SCNpilot_cont_1000_p_scaffold_8467_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3876..4181
DNA (306bp) protein (102aa)
Putative conjugal transfer protein TrbD n=1 Tax=uncultured bacterium RepID=U3LPE8_9BACT
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KIO48648.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3
SCNpilot_cont_1000_p_scaffold_8467_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4182..5387
DNA (1206bp) protein (402aa)
transporter n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377326
Transporter {ECO:0000313|EMBL:KIO48647.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CagE, TrbE, VirB component of type IV transporter system; K03199 type IV secretion system protein VirB4
SCNpilot_cont_1000_p_scaffold_8467_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5401..6603
DNA (1203bp) protein (401aa)
Putative mating pair formation protein TrbE n=1 Tax=uncultured bacterium RepID=U3LPV7_9BACT
Transporter {ECO:0000313|EMBL:KIO48647.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CagE, TrbE, VirB component of type IV transporter system; K03199 type IV secretion system protein VirB4
SCNpilot_cont_1000_p_scaffold_8467_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6584..6796
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48646.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Displaying 11 items

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