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SCNpilot_cont_1000_p_scaffold_7433

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7433_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..897
DNA (897bp) protein (299aa)
conjugal transfer protein TraG n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAF5 rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:EYR82470.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
traG; Ti-type conjugative transfer system protein TraG; K03205 type IV secretion system protein VirD4 rbh
SCNpilot_cont_1000_p_scaffold_7433_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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884..1798
DNA (915bp) protein (305aa)
Putative nucleotidyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXF5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR82469.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nucleotidyltransferase protein rbh
SCNpilot_cont_1000_p_scaffold_7433_3
unknown

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1795..2049
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7433_4
bacterium YEK0313, Bacteria

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comp(2070..2366)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAE7
Uncharacterized protein {ECO:0000313|EMBL:CEJ16315.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7433_5
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2403..3026)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAE8 rbh
putative ATPase, ParA type; K03496 chromosome partitioning protein rbh
Putative ATPase, ParA type {ECO:0000313|EMBL:ACS43736.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_1000_p_scaffold_7433_6
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3094..3399)
DNA (306bp) protein (102aa)
plasmid stabilization protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAE9
hypothetical protein
Plasmid stabilization protein {ECO:0000313|EMBL:EQB33666.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
SCNpilot_cont_1000_p_scaffold_7433_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3396..3665)
DNA (270bp) protein (90aa)
CopG family transcriptional regulator n=3 Tax=Bacteria RepID=C6KTN3_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:EYR84198.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7433_8

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comp(3942..4817)
DNA (876bp) protein (292aa)
replication protein A n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAEA rbh
Putative replicating protein RepA {ECO:0000313|EMBL:BAH89329.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
replication protein A
SCNpilot_cont_1000_p_scaffold_7433_9
bacterium YEK0313, Bacteria

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comp(5010..5219)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037EB2A6
Uncharacterized protein {ECO:0000313|EMBL:CEJ16320.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_1000_p_scaffold_7433_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5328..5999)
DNA (672bp) protein (224aa)
resolvase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAEC rbh
Site-specific recombinase {ECO:0000313|EMBL:EYR82486.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transposon Tn552 DNA-invertase BinR rbh
Displaying 10 items

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