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SCNpilot_cont_1000_p_scaffold_5071

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5071_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..737)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000380B1E5
Uncharacterized protein {ECO:0000313|EMBL:KIZ40080.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5071_2
unknown

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comp(724..834)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5071_3
unknown

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comp(848..1198)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5071_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1191..1613)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B686F4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_1000_p_scaffold_5071_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1635..2291)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000368278F
Redoxin {ECO:0000313|EMBL:ETR79358.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
thioredoxin-thioldisulfide interchange protein
SCNpilot_cont_1000_p_scaffold_5071_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2288..2908)
DNA (621bp) protein (207aa)
Thiol:disulfide interchange protein cycY n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F905_9RHIZ
Thiol:disulfide oxidoreductase DsbE {ECO:0000313|EMBL:KIZ40089.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cycY; cytochrome c-type biogenesis protein CycY (periplasmic thioredoxin)
SCNpilot_cont_1000_p_scaffold_5071_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3061..3525)
DNA (465bp) protein (155aa)
Putative metal-binding protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CLB0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIZ40079.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
putative metal-binding protein
SCNpilot_cont_1000_p_scaffold_5071_8
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3536..3970)
DNA (435bp) protein (145aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V565_9BRAD
cytochrome C class I; K08738 cytochrome c
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_1000_p_scaffold_5071_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4032..4754)
DNA (723bp) protein (241aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V565_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40078.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cytochrome c class I
SCNpilot_cont_1000_p_scaffold_5071_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4766..6220)
DNA (1455bp) protein (485aa)
Multicopper oxidase type 3 n=2 Tax=Afipia RepID=D6V100_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30432.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative multicopper oxidase domain protein rbh
SCNpilot_cont_1000_p_scaffold_5071_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6363..6725)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0Z9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30433.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5071_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6826..6942)
DNA (117bp) protein (39aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0Z8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53378.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5071_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6958..8265)
DNA (1308bp) protein (436aa)
Heavy metal efflux pump, CzcA family n=2 Tax=Afipia RepID=D6V0Z7_9BRAD
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKS30435.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Displaying 13 items

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