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SCNpilot_cont_1000_p_scaffold_5627

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5627_1
unknown

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comp(71..685)
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5627_2
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(999..1958)
DNA (960bp) protein (320aa)
Putative site specific integrase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWK4_AROAE
int; putative site specific integrase
Putative site specific integrase {ECO:0000313|EMBL:CAI10560.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_cont_1000_p_scaffold_5627_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1958..2233)
DNA (276bp) protein (92aa)
Plasmid stabilization protein {ECO:0000313|EMBL:KIO48690.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Plasmid stabilization system id=4732860 bin=GWC2_Syntrophobacterales_56_13 species=Sinorhizobium meliloti genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
plasmid stabilization system
SCNpilot_cont_1000_p_scaffold_5627_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2237..2479)
DNA (243bp) protein (81aa)
Transcriptional regulator, CopG family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y056_MESOW
CopG family transcriptional regulator {ECO:0000313|EMBL:KIO48691.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CopG family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_5627_5
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2691..3842)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AIF8_PSEF1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF20546.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
SCNpilot_cont_1000_p_scaffold_5627_6
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3889..4995)
DNA (1107bp) protein (369aa)
BsuBIPstI restriction endonuclease domain protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JA95_BURVG rbh
BsuBIPstI restriction endonuclease domain-containing protein rbh
BsuBIPstI restriction endonuclease domain protein {ECO:0000313|EMBL:ABO53198.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
SCNpilot_cont_1000_p_scaffold_5627_7
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4999..6495)
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZR33_ACICS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEK58728.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
SCNpilot_cont_1000_p_scaffold_5627_8
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6528..7100)
DNA (573bp) protein (191aa)
Uncharacterized protein n=7 Tax=Salmonella enterica I RepID=D0ZVD0_SALT1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY87935.1}; TaxID=588858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhimurium (strain 14028s / SGSC 2262).;"
SCNpilot_cont_1000_p_scaffold_5627_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7315..7500)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48697.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_5627_10
unknown

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8039..8125
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 10 items

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