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SCNpilot_cont_1000_p_scaffold_5803

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5803_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..360
DNA (360bp) protein (120aa)
Type IV secretion system protein VirB4 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXH1_9RHIZ
Type IV secretion/conjugal transfer ATPase, VirB4 family {ECO:0000313|EMBL:EYR82770.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
type IV secretion/conjugal transfer ATPase; K03199 type IV secretion system protein VirB4
SCNpilot_cont_1000_p_scaffold_5803_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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353..1516
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCX9_9RHIZ rbh
Putative soluble lytic transglycosylase {ECO:0000313|EMBL:EYR82769.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_1000_p_scaffold_5803_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1528..2244
DNA (717bp) protein (239aa)
UPI0003D04ACA related cluster n=1 Tax=unknown RepID=UPI0003D04ACA
Conjugal transfer protein {ECO:0000313|EMBL:EYR82768.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein
SCNpilot_cont_1000_p_scaffold_5803_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2251..2424
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQQ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82767.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_1000_p_scaffold_5803_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2429..3448
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN46_9RHIZ rbh
Type IV secretory pathway, VirB6 component {ECO:0000313|EMBL:EYR82766.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein; K03201 type IV secretion system protein VirB6
SCNpilot_cont_1000_p_scaffold_5803_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3503..3736
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5J0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82765.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_1000_p_scaffold_5803_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3753..4124
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CL76_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82764.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_1000_p_scaffold_5803_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4279..5013
DNA (735bp) protein (245aa)
VirB8 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVE8_9RHIZ rbh
VirB8 {ECO:0000313|EMBL:EYR82763.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
virB8; type IV secretion protein VirB8; K03203 type IV secretion system protein VirB8
SCNpilot_cont_1000_p_scaffold_5803_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5010..5795
DNA (786bp) protein (262aa)
P-type conjugative transfer protein VirB9 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQP5_9RHIZ rbh
P-type conjugative transfer protein VirB9 {ECO:0000313|EMBL:EYR82762.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
SCNpilot_cont_1000_p_scaffold_5803_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5792..7210
DNA (1419bp) protein (473aa)
Type IV secretion system protein VirB10 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN42_9RHIZ rbh
Type IV secretion system protein VirB10 {ECO:0000313|EMBL:EYR82761.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
conjugal transfer protein; K03195 type IV secretion system protein VirB10
SCNpilot_cont_1000_p_scaffold_5803_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7207..7389
DNA (183bp) protein (61aa)
Type IV secretion system protein VirB11 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5I5_9RHIZ
Type IV secretion system protein VirB11 {ECO:0000313|EMBL:EYR82760.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 11 items

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