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SCNpilot_cont_1000_p_scaffold_3876

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3876_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..372
DNA (372bp) protein (124aa)
Response regulator receiver n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSV1_ALIDB
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEB86505.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_1000_p_scaffold_3876_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(511..1236)
DNA (726bp) protein (242aa)
hypothetical protein id=12550664 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EER60640.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3876_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1262..2638)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4F9_ACIDE rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2635..3885)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4G0_ACIDE rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3882..6098)
DNA (2217bp) protein (739aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4G1_ACIDE rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6107..6883)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4G2_ACIDE rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6880..7191)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4G3_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER60645.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_cont_1000_p_scaffold_3876_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7539..8807)
DNA (1269bp) protein (423aa)
Type II secretory pathway, component PulF n=1 Tax=Acidovorax sp. CF316 RepID=J0KTP6_9BURK rbh
type II secretion system protein; K02455 general secretion pathway protein F
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8828..10249)
DNA (1422bp) protein (474aa)
type II secretion system protein id=12550107 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
type II secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10225..10530)
DNA (306bp) protein (102aa)
type II secretion system protein id=12550107 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_11
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10514..12055)
DNA (1542bp) protein (514aa)
Type II secretory pathway, component ExeA (Predicted ATPase) n=1 Tax=Acidovorax sp. CF316 RepID=J0KLL5_9BURK rbh
Type II secretory pathway, component ExeA (Predicted ATPase) {ECO:0000313|EMBL:EJE54490.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
type II secretion system protein
SCNpilot_cont_1000_p_scaffold_3876_12
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12052..13008)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EQM9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54491.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
mechanosensitive ion channel MscS
SCNpilot_cont_1000_p_scaffold_3876_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13005..14807)
DNA (1803bp) protein (601aa)
type II secretion system protein; K02453 general secretion pathway protein D id=12550110 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
type II secretion system protein; K02453 general secretion pathway protein D rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14839..15426)
DNA (588bp) protein (196aa)
Uncharacterized protein id=12550111 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_15
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15423..16727)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EQV0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJE54494.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3876_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16724..17230)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KLL9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54495.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_cont_1000_p_scaffold_3876_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17231..18148)
DNA (918bp) protein (306aa)
Putative type II secretion system protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T810_ACIDE rbh
Putative type II secretion system protein {ECO:0000313|EMBL:EER59389.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
type II secretion system protein
SCNpilot_cont_1000_p_scaffold_3876_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18206..18925)
DNA (720bp) protein (240aa)
Putative type II secretion system protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T811_ACIDE rbh
type II secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_1000_p_scaffold_3876_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18949..19698)
DNA (750bp) protein (250aa)
Putative type II secretion system protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T812_ACIDE rbh
Putative type II secretion system protein {ECO:0000313|EMBL:EER59391.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
type II secretion system protein
SCNpilot_cont_1000_p_scaffold_3876_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20065..20832)
DNA (768bp) protein (256aa)
Flagellar biosynthetic protein fliR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G625_ALIDK rbh
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR rbh
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_1000_p_scaffold_3876_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20840..21109)
DNA (270bp) protein (90aa)
flagellar biosynthesis protein FliQ n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003607367
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:GAD23938.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_cont_1000_p_scaffold_3876_22
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21123..21887)
DNA (765bp) protein (255aa)
Flagellar biosynthetic protein FliP n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCC9_ACISJ
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:ABM43904.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_cont_1000_p_scaffold_3876_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21880..22206)
DNA (327bp) protein (109aa)
Flagellar biosynthesis protein, FliO n=2 Tax=Acidovorax RepID=A1WCD0_ACISJ
flagellar biosynthesis protein, FliO; K02418 flagellar protein FliO/FliZ
Flagellar biosynthesis protein, FliO {ECO:0000313|EMBL:ABM43905.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_cont_1000_p_scaffold_3876_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22190..22651)
DNA (462bp) protein (154aa)
Flagellar motor switch protein FliN n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G629_ALIDK
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AEB86510.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_1000_p_scaffold_3876_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22641..23645)
DNA (1005bp) protein (335aa)
flagellar motor switch protein FliM n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DF676
Flagellar motor switch protein flim {ECO:0000313|EMBL:GAD23934.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
flagellar motor switch protein flim; K02416 flagellar motor switch protein FliM
SCNpilot_cont_1000_p_scaffold_3876_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23670..24197)
DNA (528bp) protein (176aa)
Flagellar basal body-associated protein FliL n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGB3_ACIET
flagellar basal body-associated protein flil; K02415 flagellar FliL protein
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:ACM34508.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_cont_1000_p_scaffold_3876_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24433..25824)
DNA (1392bp) protein (464aa)
Flagellar hook-length control protein-like protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G632_ALIDK
flagellar hook-length control protein-like protein; K02414 flagellar hook-length control protein FliK
Flagellar hook-length control protein-like protein {ECO:0000313|EMBL:AEB86513.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_1000_p_scaffold_3876_28
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25828..26292)
DNA (465bp) protein (155aa)
Flagellar export protein FliJ n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCD5_ACISJ
flagellar export protein FliJ; K02413 flagellar FliJ protein
Flagellar export protein FliJ {ECO:0000313|EMBL:ABM43910.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_cont_1000_p_scaffold_3876_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26304..27710)
DNA (1407bp) protein (469aa)
flagellar protein export ATPase FliI (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
ATP synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EBA58
Flagellar biosynthesis/type III secretory pathway ATPase {ECO:0000313|EMBL:GAD23930.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_cont_1000_p_scaffold_3876_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27700..28422)
DNA (723bp) protein (241aa)
Flagellar assembly protein FliH/Type III secretion system HrpE n=2 Tax=Alicycliphilus denitrificans RepID=E8TSW2_ALIDB
flagellar assembly protein FliH; K02411 flagellar assembly protein FliH
Flagellar assembly protein FliH/Type III secretion system HrpE {ECO:0000313|EMBL:AEB86516.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 1-30 of 32 in total

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