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SCNpilot_cont_1000_p_scaffold_6283

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_6283_1
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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100..228
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4PDJ3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJO31892.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
SCNpilot_cont_1000_p_scaffold_6283_2
unknown

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419..535
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_6283_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563..718
DNA (156bp) protein (52aa)
COG0286: Type I restriction-modification system methyltransferase subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFR7_9PROT
Type I restriction endonuclease subunit M {ECO:0000313|EMBL:KIO48660.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_6283_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(779..1405)
DNA (627bp) protein (209aa)
hypothetical protein id=12555726 bin=CNBR_ACIDO species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EIG58041.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_6283_5
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1380..2567)
DNA (1188bp) protein (396aa)
XRE family transcriptional regulator id=12555725 bin=CNBR_ACIDO species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
Putative Zn peptidase {ECO:0000313|EMBL:EIG58040.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_6283_6
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2564..3946)
DNA (1383bp) protein (461aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
Putative PP-loop superfamily ATPase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QE33_9BRAD rbh
hypothetical protein
SCNpilot_cont_1000_p_scaffold_6283_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3943..4515)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QE32_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG58038.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_6283_8
unknown

Not on your lists

comp(4667..4996)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_6283_9
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5031..5807)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS23_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:AJW95427.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
SCNpilot_cont_1000_p_scaffold_6283_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5920..6819)
DNA (900bp) protein (300aa)
Bacteriophage T4 late gene expression-blocking protein n=6 Tax=Escherichia coli RepID=LIT_ECOLI rbh
phage exclusion protein Lit rbh
Peptidase U49 family protein {ECO:0000313|EMBL:CEE03624.1}; T4 phage exclusion protein, cell death peptidase, e14 prophage {ECO:0000313|EMBL:AKF55034.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying 10 items

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