name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_119_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(238..780)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JMK9_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL69095.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
899..1879
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V078_VARPE
rbh
LysR family transcriptional regulator
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34392.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_119_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1893..2066)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SU33_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69097.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_119_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2193..2999
|
Putative phosphohydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2K7A4_9BURK
rbh
Putative phosphohydrolase {ECO:0000313|EMBL:EJL69098.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
metallophosphoesterase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3107..4603
|
amidase (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CCX7_9BURK
rbh
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJL69099.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_119_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4616..5233)
|
Regulatory protein TetR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V075_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24254.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
TetR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5320..6054)
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2JML4_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24253.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
GntR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6317..7651
|
Rieske (2Fe-2S) iron-sulfur domain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V073_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24252.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
rieske (2fe-2S) iron-sulfur domain
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7662..9110
|
Glutamine synthetase n=1 Tax=Variovorax sp. CF313 RepID=J2SU37_9BURK
rbh
Glutamine synthetase {ECO:0000313|EMBL:EJL69102.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative glutamate--ammonia ligase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9130..9453
|
ferredoxin n=1 Tax=Variovorax paradoxus RepID=UPI00035E9D74
Ferredoxin {ECO:0000313|EMBL:EJL69103.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative ferredoxin
|
|
SCNpilot_cont_1000_p_scaffold_119_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9549..10742
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003745999
rbh
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
rbh
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47301.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_119_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10810..11670
|
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2JML7_9BURK
rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL69105.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative high-affinity branched-chain amino acid ABC transporter, permease protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11667..12629
|
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V068_VARPE
rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
rbh
Inner-membrane translocator {ECO:0000313|EMBL:ADU34382.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_119_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12626..13396
|
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2SU40_9BURK
rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL69107.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13389..14093
|
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2K7B3_9BURK
rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL69108.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14199..15356)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F679E
rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL69517.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative extracellular ligand-binding receptor
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15460..16812)
|
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22111.1}; EC=1.11.1.5 {ECO:0000313|EMBL:AJG22111.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000382DF50
rbh
di-heme cytochrome c peroxidase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_18
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16809..18377)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F00C3
rbh
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJK20531.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
Ser/Thr protein phosphatase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18473..20056)
|
phospholipase n=1 Tax=Variovorax paradoxus RepID=UPI00036B9131
rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EJL69518.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
phospholipase d/transphosphatidylase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20142..21371
|
Putative membrane protein required for spore maturation n=1 Tax=Variovorax sp. CF313 RepID=J3CDL8_9BURK
rbh
Putative membrane protein required for spore maturation {ECO:0000313|EMBL:EJL69519.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
nucleoside recognition domain-containing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21353..23344)
|
Alkyl sulfatase-like hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2JNZ0_9BURK
rbh
Alkyl sulfatase-like hydrolase {ECO:0000313|EMBL:EJL69520.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
steroL-binding domain-containing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23418..24347
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CDZ7_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL69521.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24458..24901
|
Conserved protein of DIM6/NTAB family n=1 Tax=Variovorax sp. CF313 RepID=J2SVE1_9BURK
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJL69522.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
flavin reductase-like domain-containing protein
|
|
SCNpilot_cont_1000_p_scaffold_119_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24898..25398
|
Putative periplasmic or secreted lipoprotein n=1 Tax=Variovorax sp. CF313 RepID=J2K8J4_9BURK
rbh
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:EJL69523.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative periplasmic phospholipid-binding protein
|
|
SCNpilot_cont_1000_p_scaffold_119_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25490..26398
|
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Variovorax sp. CF313 RepID=J3CDM1_9BURK
rbh
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EJL69524.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26395..27348
|
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Glutaminase n=1 Tax=Variovorax sp. CF313 RepID=J2JNZ5_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27362..28354)
|
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Variovorax sp. CF313 RepID=J3CDZ9_9BURK
rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJL69526.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
NADH(P)-binding domain-containing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28450..29397
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SVE4_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL69527.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29394..29888
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000372C2EB
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL69528.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_119_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30267..31460
|
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4C3_VARPD
rbh
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
rbh
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47286.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|