name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_329_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..1042)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2D7_VARPE
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29242.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1056..1544)
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000375AD60
rbh
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29243.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1740..2150)
|
RNA recognition motif-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X588_VARPD
RNA recognition motif-containing protein
RNA recognition motif-containing protein {ECO:0000313|EMBL:AGU47514.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2331..2567)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2D4_VARPE
hypothetical protein; K09954 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34565.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_329_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2588..2965)
|
Translation initiation factor SUI1, putative, prokaryotic n=1 Tax=Variovorax sp. CF313 RepID=J3CJ54_9BURK
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29245.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
translation initiation factor sui1; K03113 translation initiation factor 1
|
|
SCNpilot_cont_1000_p_scaffold_329_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3015..4298
|
DNA/RNA helicase, superfamily II n=1 Tax=Variovorax sp. CF313 RepID=J2KHQ4_9BURK
rbh
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:EJL72638.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
DEAD/DEAH box helicase domain-containing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4331..5089)
|
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Variovorax sp. CF313 RepID=J2T3P8_9BURK
rbh
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:EJL72637.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5164..6339)
|
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2D0_VARPE
rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADU34561.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_329_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6347..7507)
|
acyL-CoA dehydrogenase domain-containing protein; K11731 citronellyl-CoA dehydrogenase [EC:1.3.99.-]
rbh
acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036486C1
rbh
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29250.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7534..8436)
|
2,4-dienoyl-CoA reductase n=1 Tax=Variovorax paradoxus RepID=UPI000361CAC1
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL72634.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
short-chain dehydrogenase/reductase sdr; K13774 citronellol/citronellal dehydrogenase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8483..10435)
|
carbamoyL-phosphate synthase l chain ATP-binding protein; K13777 geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
rbh
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Variovorax sp. CF313 RepID=J2KHP9_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29252.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10432..12042)
|
methylcrotonoyL-CoA carboxylase (EC:6.4.1.4); K13778 geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
rbh
Methylcrotonoyl-CoA carboxylase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2C6_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29253.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12139..12915)
|
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00036016D6
rbh
MHYT domain-containing protein {ECO:0000313|EMBL:EJL72631.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative signaling protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13050..14765)
|
SMP-30/Gluconolaconase/LRE-like region-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2C4_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29255.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
smp-30/gluconolaconase/lre-like region-containing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14907..16130)
|
Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CJ49_9BURK
rbh
Putative membrane protein {ECO:0000313|EMBL:EJL72629.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16162..17328)
|
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Acetylornithine deacetylase ArgE n=1 Tax=Variovorax sp. CF313 RepID=J2KHP6_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17463..17993
|
h16_A2722; cytosine/adenosine deaminase (EC:3.5.4.-)
CMP deaminase n=1 Tax=Variovorax paradoxus RepID=UPI00037039F5
rbh
Cytosine/adenosine deaminase {ECO:0000313|EMBL:EJL72626.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18079..19281
|
Amidohydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2JXM6_9BURK
rbh
Amidohydrolase {ECO:0000313|EMBL:EJL72625.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19289..20383
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CJ47_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL72624.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20373..21503)
|
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KHP2_9BURK
rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL72623.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative branched-chain amino acid-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21555..23615
|
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Variovorax sp. CF313 RepID=J2T3N3_9BURK
rbh
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:EJL72622.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
molybdopterin dinucleotide-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23612..24736
|
Aminopeptidase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2E2_VARPE
rbh
aminopeptidase
rbh
Aminopeptidase {ECO:0000313|EMBL:ADU34573.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_329_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24729..25043
|
Polyhydroxyalkanoic acid system protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2E3_VARPE
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29262.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
polyhydroxyalkanoic acid system protein
|
|
SCNpilot_cont_1000_p_scaffold_329_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25056..26297
|
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CJ44_9BURK
rbh
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL72619.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
CoA-transferase, family 3
rbh
|
|
SCNpilot_cont_1000_p_scaffold_329_25
Pseudomonas sp. GM21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26365..28026
|
aprE; peptidase S8/S53 subtilisin kexin sedolisin (EC:3.4.21.62)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000368D4E2
rbh
Subtilisin-like serine protease {ECO:0000313|EMBL:EJM24660.1}; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM21.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_26
Pseudomonas sp. GM21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28023..28274
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037393EB
Uncharacterized protein {ECO:0000313|EMBL:EJM24661.1}; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM21.;"
|
|
SCNpilot_cont_1000_p_scaffold_329_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
|
Not on your lists |
28333..29247
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037F761E
rbh
DNA/RNA non-specific endonuclease; K01173 endonuclease G, mitochondrial
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
|
|
SCNpilot_cont_1000_p_scaffold_329_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29259..29516)
|
Acyl-CoA-binding protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHN7_9BURK
Acyl-CoA-binding protein {ECO:0000313|EMBL:EJL72618.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acyL-CoA-binding protein acbp
|
|
SCNpilot_cont_1000_p_scaffold_329_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29597..30439)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2F4_VARPE
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU34585.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_329_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30446..31171)
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CJB4_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL72616.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transcriptional regulator, TetR family
rbh
|