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SCNpilot_cont_1000_p_scaffold_350

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_350_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..686
DNA (684bp) protein (228aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9P0_VARPE
electron transfer flavoprotein alpha subunit; K03522 electron transfer flavoprotein alpha subunit
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ADU35088.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_1000_p_scaffold_350_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

733..1719
DNA (987bp) protein (329aa)
ABC transporter substrate-binding protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QJ88_RALPI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_1000_p_scaffold_350_3
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1752..2906
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXK3_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETF03759.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
putative acyl-CoA dehydrogenase fadE25 rbh
SCNpilot_cont_1000_p_scaffold_350_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2928..3725
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase id=4793456 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
enoyl-CoA hydratase
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_cont_1000_p_scaffold_350_5
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3755..4660)
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMF9_METNO
Transcriptional regulator LysR family {ECO:0000313|EMBL:BAO94096.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_350_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4766..6253)
DNA (1488bp) protein (496aa)
aldehyde dehydrogenase (EC:1.2.99.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] rbh
Aldehyde dehydrogenase n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B8X8_9BURK rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_350_7
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6329..8071)
DNA (1743bp) protein (581aa)
glucose-methanol-choline oxidoreductase; K00119 [EC:1.1.99.-] rbh
Putative glucose-methanol-choline oxidoreductase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q143U5_BURXL rbh
Putative glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABE29394.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_1000_p_scaffold_350_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8357..9265)
DNA (909bp) protein (303aa)
acyl-CoA thioesterase; K10805 acyl-CoA thioesterase II [EC:3.1.2.-]
Acyl-CoA thioesterase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N03_BURS3
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_350_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9269..10060)
DNA (792bp) protein (264aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL14 RepID=U8K0L5_PSEAI
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48285.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_1000_p_scaffold_350_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10212..11327
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B7AC96 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_1000_p_scaffold_350_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11375..12172)
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ENY81729.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ENY81729.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
enoyl-CoA hydratase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17]
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00035CB9FD
SCNpilot_cont_1000_p_scaffold_350_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12216..13442)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000374BF76
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48305.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_1000_p_scaffold_350_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13525..14028)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL13 RepID=U9I9J3_PSEAI
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44574.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_1000_p_scaffold_350_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14025..15059)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL13 RepID=U9IGC9_PSEAI rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIK92255.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative aminoglycoside phosphotransferase
SCNpilot_cont_1000_p_scaffold_350_15
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15086..15709)
DNA (624bp) protein (208aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E816_9SPHN
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48300.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_1000_p_scaffold_350_16
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15724..16884)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKH68247.1}; EC=1.3.99.- {ECO:0000313|EMBL:AKH68247.1};; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spongiibacter sp. IMCC21906.;"
acyl-CoA dehydrogenase-like; K04117 cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-] rbh
Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZH0_9BURK rbh
SCNpilot_cont_1000_p_scaffold_350_17
Pseudomonas sp. 19-rlim, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17044..18600)
DNA (1557bp) protein (519aa)
long-chain-fatty-acid CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000373FBFF rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:AEO27382.1}; TaxID=1084570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 19-rlim.;"
SCNpilot_cont_1000_p_scaffold_350_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18686..19903)
DNA (1218bp) protein (406aa)
fadJ2; fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3); K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Fatty acid oxidation complex alpha subunit n=2 Tax=Escherichia coli RepID=I4SUY5_ECOLX
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:KDX38556.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
SCNpilot_cont_1000_p_scaffold_350_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20091..20852
DNA (762bp) protein (254aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1L8_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDY19630.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_350_20
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20878..22074
DNA (1197bp) protein (399aa)
Ethanolamine utilization protein EutN n=2 Tax=Labrenzia RepID=U7GCF6_9RHOB
Ethanolamine utilization protein EutN {ECO:0000313|EMBL:ERP94306.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
extracellular ligand-binding receptor
SCNpilot_cont_1000_p_scaffold_350_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22096..22974
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003778EC0
ABC transporter permease {ECO:0000313|EMBL:KGF82035.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_1000_p_scaffold_350_22
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22979..24781
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00036C5DD6 rbh
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:KJR48486.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
amino acid/amide ABC transporter membrane protein 2, HAAT family, amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
SCNpilot_cont_1000_p_scaffold_350_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24778..25647
DNA (870bp) protein (290aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BI8_RHOPB
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ABD86248.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_1000_p_scaffold_350_24
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25644..26447
DNA (804bp) protein (268aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036154D4
Uncharacterized protein {ECO:0000313|EMBL:KJC55982.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_1000_p_scaffold_350_25
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26466..27470
DNA (1005bp) protein (335aa)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EPA99394.1}; EC=1.1.1.169 {ECO:0000313|EMBL:EPA99394.1};; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003448F3D rbh
2-dehydropantoate 2-reductase rbh
SCNpilot_cont_1000_p_scaffold_350_26
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27481..28350)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B090_9RHOO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48287.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_1000_p_scaffold_350_27
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28414..29259)
DNA (846bp) protein (282aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Putative enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CAJ63407.1}; EC=4.2.1.- {ECO:0000313|EMBL:CAJ63407.1};; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003714D76
SCNpilot_cont_1000_p_scaffold_350_28
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29252..31108)
DNA (1857bp) protein (619aa)
long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YYK2_9ALTE
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGD87871.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
SCNpilot_cont_1000_p_scaffold_350_29
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31105..31941)
DNA (837bp) protein (279aa)
ABC transporter (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter, ATP-binding protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XF09_9BURK
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFF74686.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
SCNpilot_cont_1000_p_scaffold_350_30
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31943..33148)
DNA (1206bp) protein (402aa)
Extracellular ligand-binding receptor n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX90_TISMK
livK; extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFK57378.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Displaying items 1-30 of 78 in total

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