name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_356_1
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(37..528)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003751291
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:EFV76965.1}; TaxID=665959 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
acetyltransferase
|
|
SCNpilot_cont_1000_p_scaffold_356_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
804..950
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2T5Q7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL73387.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_356_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(975..1940)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000380ED13
rbh
putative Bug-like extracytoplasmic solute binding receptor, TTT family
rbh
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU50460.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_356_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1989..2369)
|
virulence protein n=1 Tax=Variovorax paradoxus RepID=UPI00037365A7
metallothiol transferase
Putative metallothiol transferase {ECO:0000313|EMBL:ACS19884.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_1000_p_scaffold_356_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2366..3349)
|
Pyruvate carboxyltransferase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CR40_VARPS
rbh
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ACS19885.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_1000_p_scaffold_356_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3346..4518)
|
CoA transferase n=1 Tax=Variovorax paradoxus RepID=UPI00036A6682
rbh
CoA-transferase, family 3
rbh
CoA-transferase, family 3 {ECO:0000313|EMBL:AGU50463.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_356_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4631..5407)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C11F8
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU36577.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_356_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5404..6132)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036E38F7
rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein {ECO:0000313|EMBL:ADU36576.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_356_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6134..11398)
|
AAA ATPase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY45_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32089.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
aaa ATPase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11470..13656)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037299DA
rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32091.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13733..14386)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000381F39A
rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32092.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ubiquinone biosynthesis hydroxylase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14421..14795)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY41_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU36571.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_356_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14798..15511)
|
phage-shock protein n=1 Tax=Variovorax paradoxus RepID=UPI000365B1C1
rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32094.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
phage shock protein PspA
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15523..15939)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY39_VARPE
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32095.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein; K09980 hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_356_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16093..17010
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XDQ2_VARPD
rbh
transcriptional regulator, LysR family
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU50464.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_356_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17020..17229)
|
transporter n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959518
Molybdenum-pterin-binding protein II {ECO:0000313|EMBL:EZP51304.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
molybdenum-pterin binding domain-containing protein
|
|
SCNpilot_cont_1000_p_scaffold_356_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17296..17673)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JZR4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL73385.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein; K09959 hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_356_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17673..19193)
|
aldB; aldehyde dehydrogenase B (EC:1.2.1.-)
rbh
NAD-dependent aldehyde dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CKF6_9BURK
rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EJL73384.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_356_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19422..21317
|
Transcriptional activator of acetoin/glycerol metabolism n=1 Tax=Variovorax sp. CF313 RepID=J2KJY1_9BURK
rbh
Transcriptional activator of acetoin/glycerol metabolism {ECO:0000313|EMBL:EJL73383.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GAF modulated Fis family sigma-54 specific transcriptional regulator
|
|
SCNpilot_cont_1000_p_scaffold_356_20
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21401..22309
|
Nitroreductase n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RNS0_COMTE
rbh
Nitroreductase {ECO:0000313|EMBL:EHN65966.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
nitroreductase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_21
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22296..23369
|
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNM5_VEREI
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM59232.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|
|
SCNpilot_cont_1000_p_scaffold_356_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23437..24273
|
O-methyltransferase involved in polyketide biosynthesis n=1 Tax=Variovorax sp. CF313 RepID=J2T5Q3_9BURK
rbh
O-methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:EJL73382.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24469..26067
|
glucan biosynthesis protein D n=1 Tax=Variovorax paradoxus RepID=UPI000371D898
rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32100.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
periplasmic glucan biosynthesis protein mdog; K03670 periplasmic glucans biosynthesis protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26081..26491)
|
peptidylprolyl isomerase (EC:5.2.1.8); K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY34_VARPE
|
|
SCNpilot_cont_1000_p_scaffold_356_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26629..28023
|
ethanolamine ammonia-lyase (EC:4.3.1.7); K03735 ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
rbh
Ethanolamine ammonia-lyase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY32_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32105.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_1000_p_scaffold_356_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28020..28775
|
Ethanolamine ammonia-lyase light chain {ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|SAAS:SAAS00064958};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ethanolamine ammonia-lyase (EC:4.3.1.7); K03736 ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
rbh
Ethanolamine ammonia-lyase, small subunit n=1 Tax=Variovorax sp. CF313 RepID=J2T5P8_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_27
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28787..30181)
|
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:ACD20538.1}; EC=1.1.99.3 {ECO:0000313|EMBL:ACD20538.1};; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00030DC9AE
rbh
cytochrome c
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_28
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30178..31950)
|
Gluconate 2-dehydrogenase n=1 Tax=Serratia marcescens VGH107 RepID=M3BA10_SERMA
rbh
GMC family oxidoreductase {ECO:0000313|EMBL:AKG71120.1}; TaxID=47917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fonticola.;"
GMC family oxidoreductase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_356_29
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31968..32714)
|
hypothetical protein; K06152 gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
gluconate 2-dehydrogenase n=1 Tax=Pseudomonas sp. 313 RepID=UPI00030EC2EF
Gluconate 2-dehydrogenase {ECO:0000313|EMBL:KIZ52425.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
|
|
SCNpilot_cont_1000_p_scaffold_356_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32891..33475
|
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Putative peroxidase-related enzyme n=1 Tax=Variovorax sp. CF313 RepID=J2JZQ4_9BURK
rbh
hypothetical protein
rbh
|