name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_433_1
unknown
|
Not on your lists |
comp(1..75)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_433_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
289..897
|
Nuclease-like domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XG39_VARPD
rbh
nuclease-like domain-containing protein
rbh
Nuclease-like domain-containing protein {ECO:0000313|EMBL:AGU51486.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_433_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
973..3375
|
Outer membrane protein assembly factor BamA n=1 Tax=Variovorax sp. CF313 RepID=J3CXB1_9BURK
rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
outer membrane protein assembly complex, yaet protein; K07277 outer membrane protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_433_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3392..4108
|
Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V107_VARPE
rbh
winged helix family two component transcriptional regulator
rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU39030.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_433_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4111..4977)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036DDED2
rbh
putative intradiol ring-cleavage dioxygenase
rbh
Putative intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:AGU51490.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_433_6
unknown
|
Not on your lists |
comp(4974..5135)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_433_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5169..6929
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
integral membrane sensor signal transduction histidine kinase; K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
rbh
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J2L4M2_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_433_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6926..7624
|
Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V112_VARPE
rbh
winged helix family two component transcriptional regulator; K07664 two-component system, OmpR family, response regulator BaeR
rbh
Variovorax paradoxus strain MEDvA23 contig_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32839.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_1000_p_scaffold_433_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7646..10411)
|
magnesium-transporting ATPase MgtA (EC:3.6.3.2)
rbh
magnesium-transporting ATPase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037BB0E5
rbh
Magnesium transporter {ECO:0000313|EMBL:GAO21036.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_cont_1000_p_scaffold_433_10
unknown
|
Not on your lists |
comp(10408..10839)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_433_11
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10857..12170)
|
Outer membrane efflux protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RZI2_9BURK
rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EHP44324.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
|
|
SCNpilot_cont_1000_p_scaffold_433_12
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12167..15298)
|
CzcA family heavy metal efflux pump n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RZI1_9BURK
rbh
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22883.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
|
|
SCNpilot_cont_1000_p_scaffold_433_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15291..16421)
|
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIX7_ACIET
rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACM34943.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
SCNpilot_cont_1000_p_scaffold_433_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16490..16822)
|
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJW6_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31254.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
|
|
SCNpilot_cont_1000_p_scaffold_433_15
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17434..18126)
|
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037FD53B
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERJ33818.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
TetR family transcriptional regulator; K09017 TetR/AcrR family transcriptional regulator
|
|
SCNpilot_cont_1000_p_scaffold_433_16
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18123..19574)
|
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TEU5_BURPP
Transcriptional regulator, GntR family with aminotransferase domain containing protein {ECO:0000313|EMBL:KIG07589.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
GntR family transcriptional regulator with aminotransferase domain
|
|
SCNpilot_cont_1000_p_scaffold_433_17
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19853..21211
|
gltD; glutamate synthase subunit beta (EC:1.4.1.13)
Glutamate synthase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0D4_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
|
|
SCNpilot_cont_1000_p_scaffold_433_18
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21297..22607
|
dihydropyrimidine dehydrogenase (EC:1.3.1.1 1.3.1.2); K00207 dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2]
Dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase (NADP+) n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TKS7_ACIAC
Tax=GWA2_Burkholderiales_64_37_curated
|
|
SCNpilot_cont_1000_p_scaffold_433_19
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22700..24205
|
nitrate reductase n=1 Tax=Duganella zoogloeoides RepID=UPI0003625CDD
rbh
NCS1 nucleoside transporter family protein {ECO:0000313|EMBL:EZP37458.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
NCS1 nucleoside transporter family; K03457 nucleobase:cation symporter-1, NCS1 family
|
|
SCNpilot_cont_1000_p_scaffold_433_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24222..25661
|
phenylhydantoinase n=1 Tax=Curvibacter lanceolatus RepID=UPI0003611512
Phenylhydantoinase {ECO:0000313|EMBL:KGF82599.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
|
|
SCNpilot_cont_1000_p_scaffold_433_21
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25682..26938
|
Amidase, hydantoinase/carbamoylase family protein {ECO:0000313|EMBL:CDG85001.1}; EC=3.5.-.- {ECO:0000313|EMBL:CDG85001.1};; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
hydantoinase/carbamoylase family amidase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87]
rbh
allantoate amidohydrolase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035D7CC2
rbh
|
|
SCNpilot_cont_1000_p_scaffold_433_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26957..28174)
|
Acyl-CoA dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2KJ08_9BURK
rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL80165.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acyL-CoA dehydrogenase domain-containing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_433_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28306..29631
|
NUDIX family protein n=1 Tax=Variovorax sp. CF313 RepID=J3CXB4_9BURK
rbh
NUDIX family protein {ECO:0000313|EMBL:EJL80166.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative hydrolase, NUDIX family
rbh
|
|
SCNpilot_cont_1000_p_scaffold_433_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29666..31885
|
YccS/YhfK family integral membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003824B56
rbh
Putative membrane protein, TIGR01666 {ECO:0000313|EMBL:EJL80167.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
integral membrane protein, yccs/yhfk family
rbh
|
|
SCNpilot_cont_1000_p_scaffold_433_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31965..32369
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036CA93D
Uncharacterized protein {ECO:0000313|EMBL:EJL80168.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_433_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32558..33253
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003639F4E
rbh
FtsH-interacting integral membrane protein {ECO:0000313|EMBL:EJL80169.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein; K06890
rbh
|
|
SCNpilot_cont_1000_p_scaffold_433_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33280..33822
|
Rrf2 family protein, putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KJ12_9BURK
rbh
Rrf2 family protein, putative transcriptional regulator {ECO:0000313|EMBL:EJL80170.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
BadM/Rrf2 family transcriptional regulator
|
|
SCNpilot_cont_1000_p_scaffold_433_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33852..35210
|
hemolysin D n=1 Tax=Variovorax paradoxus RepID=UPI00036FAF8C
rbh
RND family efflux transporter mfp subunit; K03585 membrane fusion protein
rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADU39040.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_433_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35221..38349
|
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V118_VARPE
rbh
transporter, hydrophobe/amphiphile efflux-1 (hae1) family
rbh
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ADU39041.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_433_30
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38493..38969
|
RNA polymerase subunit sigma-24 n=1 Tax=Comamonas sp. B-9 RepID=UPI00039594F1
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGH27900.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|