name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_461_1
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(191..2137)
|
Uncharacterized protein {ECO:0000313|EMBL:EWS62036.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Putative uncharacterized protein id=4815978 bin=GWA2_Elusi_like_61_42 species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
rbh
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_2
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2134..2649)
|
Uncharacterized protein {ECO:0000313|EMBL:EWS62035.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Uncharacterized protein id=4815977 bin=GWA2_Elusi_like_61_42 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_461_3
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2646..3860)
|
Uncharacterized protein {ECO:0000313|EMBL:EWS56875.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Putative uncharacterized protein id=4815976 bin=GWA2_Elusi_like_61_42 species=Xanthomonas campestris genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
rbh
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_461_4
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3883..4113)
|
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
Putative helicase, superfamily I n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q7WXG7_CUPNH
uvrD; helicase superfamily protein I
|
|
SCNpilot_cont_1000_p_scaffold_461_5
unknown
|
Not on your lists |
comp(4228..4518)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_461_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5227..5658)
|
glyoxalase I n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DDE64
Lactoylglutathione lyase {ECO:0000313|EMBL:GAD22043.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
|
SCNpilot_cont_1000_p_scaffold_461_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5738..6418)
|
glutathione s-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
rbh
Glutathione S-transferase n=1 Tax=Variovorax sp. CF313 RepID=J2KG94_9BURK
rbh
Glutathione S-transferase {ECO:0000313|EMBL:EJL79210.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_461_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6520..7206)
|
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035D6CF0
rbh
ABC transporter related protein {ECO:0000313|EMBL:ADU38446.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_461_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7203..8879)
|
iron ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037287F5
rbh
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein
rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38445.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_461_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9025..10086)
|
iron ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C7101
rbh
putative ABC transporter, iron-binding protein
rbh
Putative ABC transporter, iron-binding protein {ECO:0000313|EMBL:AGU50906.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_461_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10243..10791)
|
aromatic compound catabolic protein n=1 Tax=Variovorax paradoxus RepID=UPI00035EFEE2
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL79217.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
thioesterase superfamily protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10867..11322
|
MarR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035D77E5
Transcriptional regulator {ECO:0000313|EMBL:EJL79218.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
MarR family transcriptional regulator
|
|
SCNpilot_cont_1000_p_scaffold_461_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11431..12744
|
Major facilitator superfamily MFS_1 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V886_VARPE
rbh
major facilitator superfamily protein
rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU38438.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_461_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12767..14188
|
Putative efflux protein, MATE family n=1 Tax=Variovorax sp. CF313 RepID=J2KGA3_9BURK
rbh
Putative efflux protein, MATE family {ECO:0000313|EMBL:EJL79220.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
mate efflux family protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14234..14944
|
short-chain dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036B5339
rbh
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26841.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative oxidoreductase, SDR family
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14957..15271)
|
signal peptide protein n=1 Tax=Variovorax paradoxus RepID=UPI0003680A3C
signal peptide protein
Putative signal peptide protein {ECO:0000313|EMBL:ACS20309.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_1000_p_scaffold_461_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15422..16159)
|
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase n=1 Tax=Variovorax sp. CF313 RepID=J2TKX6_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26843.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
class ii aldolase/adducin family protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16198..16842)
|
2-keto-3-deoxy-6-phosphogluconate aldolase n=1 Tax=Variovorax sp. CF313 RepID=J2L1V3_9BURK
rbh
2-keto-3-deoxy-6-phosphogluconate aldolase {ECO:0000313|EMBL:EJL79223.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_461_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16839..17750)
|
2-dehydro-3-deoxygalactonokinase n=1 Tax=Variovorax paradoxus RepID=UPI000370DBF4
rbh
2-keto-3-deoxy-galactonokinase {ECO:0000313|EMBL:EJL79224.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative 2-dehydro-3-deoxygalactonokinase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17751..19487)
|
Dihydroxyacid dehydratase/phosphogluconate dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J2KGA9_9BURK
rbh
Dihydroxyacid dehydratase/phosphogluconate dehydratase {ECO:0000313|EMBL:EJL79225.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_461_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19638..20381
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CVS0_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL79226.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative transcriptional regulator, GntR family
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20489..21871
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003648D92
rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJL79227.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative ABC transporter, substrate-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21909..22799
|
Permease component of ABC-type sugar transporter n=1 Tax=Variovorax sp. CF313 RepID=J2L1V9_9BURK
rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL79228.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22796..23647
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V876_VARPE
rbh
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38428.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_461_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23671..24741
|
sugar ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003711EE3
rbh
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL79230.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter; K02023 multiple sugar transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24755..25852)
|
endonuclease n=1 Tax=Variovorax paradoxus RepID=UPI000365BBD0
rbh
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26848.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
endonuclease/exonuclease/phosphatase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25913..27718)
|
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
DEAD/DEAH box helicase domain-containing protein; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
rbh
ATP-dependent RNA helicase RhlE n=1 Tax=Variovorax sp. CF313 RepID=J2TKY2_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_461_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28021..29682
|
ATP-binding cassette protein, ChvD family n=1 Tax=Variovorax sp. CF313 RepID=J2L1W3_9BURK
rbh
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:EJL79233.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_461_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29769..31556)
|
para-aminobenzoate synthase, component I; K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
rbh
Aminodeoxychorismate synthase, component I n=1 Tax=Variovorax sp. CF313 RepID=J2KGB8_9BURK
rbh
Aminodeoxychorismate synthase, component I {ECO:0000313|EMBL:EJL79235.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_461_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31546..32925)
|
TRAP transporter solute receptor, TAXI family n=1 Tax=Variovorax sp. CF313 RepID=J3CVS7_9BURK
rbh
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EJL79236.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
trap transporter solute receptor, taxi family
rbh
|