name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_634_1
unknown
|
Not on your lists |
comp(236..427)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_634_2
unknown
|
Not on your lists |
comp(791..1228)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_634_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2029..19674)
|
YD repeat protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYG0_VARPS
rbh
YD repeat protein {ECO:0000313|EMBL:ACS18919.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20079..20507
|
Putative signal-transduction protein containing cAMP-binding and CBS domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2K351_9BURK
Putative signal-transduction protein containing cAMP-binding and CBS domain containing protein {ECO:0000313|EMBL:EJL74580.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
signal transduction protein with cbs domains
|
|
SCNpilot_cont_1000_p_scaffold_634_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20625..20984
|
Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Variovorax sp. CF313 RepID=J3CMP8_9BURK
Sigma 54 modulation protein / S30EA ribosomal protein {ECO:0000313|EMBL:EJL74581.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ribosomal subunit interface protein
|
|
SCNpilot_cont_1000_p_scaffold_634_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20971..21459)
|
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2T934_9BURK
Putative transcriptional regulator {ECO:0000313|EMBL:EJL74582.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
MerR family transcriptional regulator
|
|
SCNpilot_cont_1000_p_scaffold_634_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21449..21871)
|
ketosteroid isomerase n=1 Tax=Variovorax paradoxus RepID=UPI000373E326
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:EJL74583.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein; K06893
|
|
SCNpilot_cont_1000_p_scaffold_634_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21989..22918)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CMF0_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL74584.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23051..23539)
|
Response regulator receiver protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V764_VARPE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADU38360.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_634_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23631..25136)
|
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Glutamate--cysteine ligase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V765_VARPE
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25359..25676)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2T936_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL74587.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
antibiotic biosynthesis monooxygenase
|
|
SCNpilot_cont_1000_p_scaffold_634_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25690..26352)
|
Carboxylesterase {ECO:0000313|EMBL:ACS20256.1}; EC=3.1.1.1 {ECO:0000313|EMBL:ACS20256.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Carboxylesterase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTR8_VARPS
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26468..26806
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V768_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU38364.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_634_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26822..27817)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037C59B7
rbh
Variovorax paradoxus strain MEDvA23 contig_76, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23247.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27974..28474
|
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Variovorax sp. CF313 RepID=J3CMF3_9BURK
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJL74589.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
|
|
SCNpilot_cont_1000_p_scaffold_634_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28488..29681)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035CC6CA
rbh
Putative GTPase, G3E family {ECO:0000313|EMBL:EJL74590.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
cobalamin synthesis protein p47k
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29785..30498)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CMQ4_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL74591.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30629..31528)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2T940_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL74592.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
short-chain dehydrogenase/reductase sdr
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31572..32504)
|
AraC family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003627839
rbh
Variovorax paradoxus strain MEDvA23 contig_76, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23240.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
AraC family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32533..33180
|
Glutathione S-transferase n=1 Tax=Variovorax sp. CF313 RepID=J2KNE0_9BURK
rbh
Glutathione S-transferase {ECO:0000313|EMBL:EJL74593.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
glutathione s-transferase domain-containing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33181..34083)
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V774_VARPE
rbh
LysR family transcriptional regulator
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38370.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_634_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34218..35540
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036555E5
rbh
major facilitator superfamily protein
rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU38371.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_634_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35581..36684
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V776_VARPE
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU38372.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_634_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36794..37591)
|
Putative enoyl-CoA hydratase/isomerase n=1 Tax=Variovorax paradoxus B4 RepID=T1XEA9_VARPD
rbh
putative enoyl-CoA hydratase/isomerase
rbh
Putative enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AGU50846.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_634_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37613..37993)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035FB36F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20261.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_1000_p_scaffold_634_26
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38096..38923)
|
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ES37_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54991.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
|
|
SCNpilot_cont_1000_p_scaffold_634_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38926..39198)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CMQ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL74596.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_634_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39301..40497
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2T944_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL74597.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_634_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40527..40739
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KNE5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL74598.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_634_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40762..41670)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V782_VARPE
rbh
hypothetical protein; K09781 hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU38378.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|