name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_754_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..470
|
transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003818C65
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:AGU49808.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_1000_p_scaffold_754_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(498..1532)
|
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVX9_VARPE
rbh
AraC family transcriptional regulator
rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU36457.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1673..3232
|
AMP-dependent synthetase and ligase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY0_VARPE
rbh
AMP-dependent synthetase and ligase
rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADU36458.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3280..4464
|
lipid-transfer protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C88A3
rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16736.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
thiolase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4478..4918
|
acyl dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI000372BE3A
maoc-like dehydratase
MaoC-like dehydratase {ECO:0000313|EMBL:ADU36460.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4933..5352
|
MaoC family dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI00035D7A39
maoc domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADU36461.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5387..6217
|
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY4_VARPE
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU36462.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6280..7068
|
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI000364E008
rbh
enoyL-CoA hydratase/isomerase
rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADU36463.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7055..7906)
|
Putative extracellular solute-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJZ5_VARPD
rbh
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34630.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative extracellular solute-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7938..8624)
|
PKHD-type hydroxylase PMI12_00569 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ybiX; Fe(II)-dependent oxygenase superfamily protein; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
rbh
PKHD-type hydroxylase PMI12_00569 n=1 Tax=Variovorax sp. CF313 RepID=J3CWD0_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8653..10947)
|
TonB-dependent siderophore receptor n=1 Tax=Variovorax sp. CF313 RepID=J2TLY7_9BURK
rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJL79577.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rubA; rubredoxin RubA; K02014 iron complex outermembrane recepter protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_12
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11221..12345
|
ATPase AAA n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H386_PSEAC
rbh
ATPase AAA {ECO:0000313|EMBL:EQM66522.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
|
|
SCNpilot_cont_1000_p_scaffold_754_13
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12342..12794
|
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RVN6_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EPX96353.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_754_14
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12791..14653
|
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI0002F3C332
rbh
Uncharacterized protein {ECO:0000313|EMBL:KIH83594.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_15
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14637..17597
|
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9T259_9RALS
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPX96355.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17610..18032)
|
Cupin domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2L2Z4_9BURK
Cupin 2 barrel domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:EJL79578.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_1000_p_scaffold_754_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18103..19056)
|
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Proline iminopeptidase n=1 Tax=Variovorax sp. CF313 RepID=J3CVY4_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19206..19751
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000364C02D
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28243.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_754_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19801..20034)
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CS28_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS19979.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20131..20595
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHD4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79580.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
activator of hsp90 ATPase 1 family protein
|
|
SCNpilot_cont_1000_p_scaffold_754_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20697..21779
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGF7_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85111.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21848..22033
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWD3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79581.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_754_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22067..23176
|
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Chorismate synthase n=1 Tax=Variovorax sp. CF313 RepID=J2TLZ2_9BURK
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23176..24369
|
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2L2Z9_9BURK
rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL79583.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative transporter, MFS-type
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24461..26641
|
Metallophosphoesterase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V230_VARPE
rbh
Metallophosphoesterase {ECO:0000313|EMBL:ADU39109.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
metallophosphoesterase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26798..28156)
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CS23_VARPS
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS19974.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_27
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28301..29920)
|
asdA; l-aspartate-beta-decarboxylase (EC:4.1.1.12); K09758 aspartate 4-decarboxylase [EC:4.1.1.12]
rbh
L-aspartate-beta-decarboxylase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AG90_COLFT
rbh
LSU ribosomal protein L4p (L1e) {ECO:0000313|EMBL:AIY39283.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
|
|
SCNpilot_cont_1000_p_scaffold_754_28
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29982..31670)
|
Putative transport protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AG89_COLFT
rbh
putative transport protein
rbh
Putative transport protein {ECO:0000313|EMBL:AEK59980.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
|
|
SCNpilot_cont_1000_p_scaffold_754_29
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31709..33397)
|
Alanine/aspartate exchanger, AAE family n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SWX5_JANMA
rbh
Alanine/aspartate exchanger, AAE family {ECO:0000313|EMBL:EZP35750.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
alanine/aspartate exchanger
rbh
|
|
SCNpilot_cont_1000_p_scaffold_754_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33676..36642
|
type VI secretion protein Vgr n=1 Tax=Variovorax paradoxus RepID=UPI000369538D
rbh
Rhs element Vgr protein {ECO:0000313|EMBL:EJL79585.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
type VI secretion system, Vgr family protein
rbh
|