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SCNpilot_cont_1000_p_scaffold_2620

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2620_1
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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384..791
DNA (408bp) protein (136aa)
Transposase n=3 Tax=Xanthomonas RepID=F0CCN4_9XANT
Transposase {ECO:0000313|EMBL:EGD16702.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
transposase
SCNpilot_cont_1000_p_scaffold_2620_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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842..1147
DNA (306bp) protein (102aa)
Transposase, IS4 family n=1 Tax=Variovorax paradoxus B4 RepID=T1XFH3_VARPD
transposase, IS4 family
Transposase, IS4 family {ECO:0000313|EMBL:AGU51318.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_1000_p_scaffold_2620_3

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1208..1540
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q83XV6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAP32753.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_2620_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1720..3168)
DNA (1449bp) protein (483aa)
transposase n=1 Tax=Variovorax paradoxus RepID=UPI00036C86C3 rbh
Transposase {ECO:0000313|EMBL:EJL68523.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transposase rbh
SCNpilot_cont_1000_p_scaffold_2620_5
Rhizobium sp. DS-S-51, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3454..4692)
DNA (1239bp) protein (413aa)
4-chloro-3-hydroxybutyrate hydrolase n=1 Tax=Rhizobium sp. DS-S-51 RepID=B1B5J1_9RHIZ rbh
4-chloro-3-hydroxybutyrate hydrolase {ECO:0000313|EMBL:BAG12296.1}; TaxID=475206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. DS-S-51.;"
beta-lactamase rbh
SCNpilot_cont_1000_p_scaffold_2620_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4894..5928)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00036CE91F rbh
Transcriptional regulator, CdaR {ECO:0000313|EMBL:AIJ26594.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
beta-lactamase
SCNpilot_cont_1000_p_scaffold_2620_7
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5936..6940)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003768F99 rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AIJ26593.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
alpha/beta hydrolase
SCNpilot_cont_1000_p_scaffold_2620_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7227..7979)
DNA (753bp) protein (251aa)
IstB domain protein ATP-binding protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D092_VARPS rbh
IstB domain protein ATP-binding protein rbh
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:ACS22436.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_1000_p_scaffold_2620_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7982..9514)
DNA (1533bp) protein (511aa)
Integrase catalytic region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D093_VARPS rbh
Integrase catalytic region rbh
Integrase catalytic region {ECO:0000313|EMBL:ACS22437.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_1000_p_scaffold_2620_10

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9940..10908
DNA (969bp) protein (323aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CVA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96990.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_2620_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10951..12111)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAT0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42367.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2620_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12620..12976
DNA (357bp) protein (119aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=B2UA41_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EED68056.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_cont_1000_p_scaffold_2620_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13026..13535)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5W3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46614.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 13 items

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