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SCNpilot_cont_1000_p_scaffold_1905

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1905_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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637..2427
DNA (1791bp) protein (597aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XDI7_VARPD rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16745.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative acyl-CoA dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_1905_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2507..3469
DNA (963bp) protein (321aa)
2-nitropropane dioxygenase npd; K00459 nitronate monooxygenase [EC:1.13.12.16] rbh
2-nitropropane dioxygenase NPD n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVX7_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16744.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_1000_p_scaffold_1905_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3466..4641
DNA (1176bp) protein (392aa)
Putative acyltransferase n=1 Tax=Variovorax sp. CF313 RepID=J2L2Y4_9BURK rbh
Putative acyltransferase {ECO:0000313|EMBL:EJL79568.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acyltransferase 3 rbh
SCNpilot_cont_1000_p_scaffold_1905_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4797..6485
DNA (1689bp) protein (563aa)
Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD n=1 Tax=Variovorax sp. CF313 RepID=J3CVX8_9BURK rbh
Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD {ECO:0000313|EMBL:EJL79569.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
cydD; thiol reductant ABC exporter, CydD subunit rbh
SCNpilot_cont_1000_p_scaffold_1905_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6482..8197
DNA (1716bp) protein (572aa)
Fused ATPase/permease component of ABC-type transporter involved in cytochrome bd biogenesis n=1 Tax=Variovorax sp. CF313 RepID=J2KHC7_9BURK rbh
Fused ATPase/permease component of ABC-type transporter involved in cytochrome bd biogenesis {ECO:0000313|EMBL:EJL79570.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative thiol reductant ABC exporter, CydC subunit rbh
SCNpilot_cont_1000_p_scaffold_1905_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8245..9858
DNA (1614bp) protein (538aa)
cydA; cytochrome d ubiquinol oxidase, subunit 1 (EC:1.10.3.-) rbh
Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Variovorax sp. CF313 RepID=J3CWC8_9BURK rbh
Cytochrome bd-type quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJL79571.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_1000_p_scaffold_1905_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9855..11009
DNA (1155bp) protein (385aa)
cydB; cytochrome d ubiquinol oxidase, subunit 2 (EC:1.10.3.-) rbh
Cytochrome d oxidase cyd, subunit II n=1 Tax=Variovorax sp. CF313 RepID=J2TLY3_9BURK rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16741.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_1000_p_scaffold_1905_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11030..11179
DNA (150bp) protein (50aa)
Putative cyd operon protein YbgT n=1 Tax=Variovorax paradoxus B4 RepID=T1XDZ0_VARPD
ybgT; putative cyd operon protein YbgT
Putative cyd operon protein YbgT {ECO:0000313|EMBL:AGU50544.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_1000_p_scaffold_1905_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11234..11821)
DNA (588bp) protein (196aa)
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CVY1_9BURK rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EJL79574.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transcriptional regulator, ArsR family rbh
SCNpilot_cont_1000_p_scaffold_1905_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12009..18182
DNA (6174bp) protein (2058aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWV1_VARPE rbh
outer membrane autotransporter barrel domain-containing protein rbh
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ADU36496.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Displaying 10 items

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