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SCNpilot_cont_1000_p_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 299 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_32_1
unknown

Not on your lists

comp(58..324)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(471..3128)
DNA (2658bp) protein (886aa)
Valine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EH17_9BACT rbh
valS; Valyl-tRNA synthetase
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_32_3
unknown

Not on your lists

3471..3749
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_4
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3863..4318)
DNA (456bp) protein (152aa)
bacterioferritin comigratory protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
AhpC/TSA family protein n=1 Tax=Roseovarius sp. 217 RepID=A3W2U5_9RHOB
AhpC/TSA family protein {ECO:0000313|EMBL:EAQ24980.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
SCNpilot_cont_1000_p_scaffold_32_5

Not on your lists

4351..7593
DNA (3243bp) protein (1081aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FG40_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09645.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_32_6
unknown

Not on your lists

7586..7801
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_7
unknown

Not on your lists

7957..9084
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9151..11100)
DNA (1950bp) protein (650aa)
30S ribosomal protein S1 id=3710603 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_32_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11189..11866)
DNA (678bp) protein (226aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase id=3710600 bin=GWC2_Alphaproteobacteria_42_16 species=Fulvimarina pelagi genus=Fulvimarina taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_32_10

Not on your lists

12006..12329
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EHN2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09648.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_32_11
unknown

Not on your lists

comp(12660..12944)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_12
Ectocarpus siliculosus, Ectocarpus, Ectocarpales, Phaeophyceae, Eukaryota

Not on your lists

12967..16944
DNA (3978bp) protein (1326aa)
Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus RepID=D8LG78_ECTSI
Beta strand repeat-containing protein {ECO:0000313|EMBL:CBN78977.1}; TaxID=2880 species="Eukaryota; Stramenopiles; PX clade; Phaeophyceae; Ectocarpales; Ectocarpaceae; Ectocarpus.;" source="Ectocarpus siliculosus (Brown alga).;"
mucin-2-like
SCNpilot_cont_1000_p_scaffold_32_13

Not on your lists

comp(16961..17161)
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=3924199 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE09016.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_32_14

Not on your lists

17268..18353
DNA (1086bp) protein (362aa)
pfk; 6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] rbh
6-phosphofructokinase id=2532110 bin=GWC2_Alphaproteobacteria_42_16 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE10089.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_32_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18436..18948
DNA (513bp) protein (171aa)
Putative cytoplasmic protein id=2532107 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K09987 hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_32_16
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18945..19145
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=2532104 bin=GWC2_Alphaproteobacteria_42_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_32_17

Not on your lists

19146..19706
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWD0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10086.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATP:cob(I)alamin adenosyltransferase
SCNpilot_cont_1000_p_scaffold_32_18
unknown

Not on your lists

comp(20249..20398)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20473..20871)
DNA (399bp) protein (133aa)
Helix-turn-helix domain protein id=3443563 bin=GWC2_Alphaproteobacteria_42_16 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_32_20
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21013..22398)
DNA (1386bp) protein (462aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E0B5_9BACT
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:CDD96160.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Sel1 domain-containing protein repeat-containing protein; K07126
SCNpilot_cont_1000_p_scaffold_32_21

Not on your lists

comp(22475..25921)
DNA (3447bp) protein (1149aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair coupling factor id=4799281 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
SCNpilot_cont_1000_p_scaffold_32_22

Not on your lists

26081..26281
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10159.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_32_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26290..26607
DNA (318bp) protein (106aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL25_KORVE
XRE family plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ABF42425.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCNpilot_cont_1000_p_scaffold_32_24
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26775..27869
DNA (1095bp) protein (365aa)
Microcin C7 self-immunity protein n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7ZAC5_BDEBC
mccF; microcin C7 self-immunity protein
Microcin C7 self-immunity protein {ECO:0000313|EMBL:AFY01609.1}; TaxID=1069642 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus str. Tiberius.;"
SCNpilot_cont_1000_p_scaffold_32_25
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27838..28110)
DNA (273bp) protein (91aa)
id=4799280 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K09159 hypothetical protein
TPR repeat region superfamily protein {ECO:0000313|EMBL:EEA96799.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. JE062.;"
SCNpilot_cont_1000_p_scaffold_32_26
unknown

Not on your lists

comp(28308..29141)
DNA (834bp) protein (278aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_27
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29460..29960
DNA (501bp) protein (167aa)
Protein ERFK n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTM8_SYNAS
Uncharacterized protein {ECO:0000313|EMBL:AHM61360.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
protein ERFK
SCNpilot_cont_1000_p_scaffold_32_28
unknown

Not on your lists

30080..30877
DNA (798bp) protein (266aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_32_29

Not on your lists

31206..32033
DNA (828bp) protein (276aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase id=4908704 bin=GWC2_Alphaproteobacteria_42_16 species=Gluconacetobacter diazotrophicus genus=Gluconacetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09867.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_32_30

Not on your lists

32030..33160
DNA (1131bp) protein (377aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVT6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09866.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 299 in total

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