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SCNpilot_cont_1000_p_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_143_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249..848
DNA (600bp) protein (200aa)
gidB; glucose inhibited division protein B; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G id=4246731 bin=GWC2_Alphaproteobacteria_42_16 species=Commensalibacter intestini genus=Commensalibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

841..1614
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EL48_9BACT rbh
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1611..2516
DNA (906bp) protein (302aa)
Chromosome partitioning protein ParB n=1 Tax=uncultured bacterium RepID=K2DWQ9_9BACT rbh
Chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2796..3086
DNA (291bp) protein (97aa)
Excinuclease ABC C subunit domain protein (Fragment) id=2979134 bin=GWC2_Alphaproteobacteria_42_16 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_5
unknown

Not on your lists

3300..3629
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4220..5209)
DNA (990bp) protein (330aa)
id=4246734 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5393..6073)
DNA (681bp) protein (227aa)
Uncharacterized protein id=4246735 bin=GWC2_Alphaproteobacteria_42_16 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K03643 LPS-assembly lipoprotein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_8

Not on your lists


comp(6060..8600)
DNA (2541bp) protein (847aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EJ73_9BACT rbh
SCNpilot_cont_1000_p_scaffold_143_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8609..9118)
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=4246798 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9527..14368)
DNA (4842bp) protein (1614aa)
NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2] rbh
NAD-glutamate dehydrogenase id=3827324 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15044..15385
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF39_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15387..15776
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DTS9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15983..16168
DNA (186bp) protein (62aa)
id=4444424 bin=GWC2_Alphaproteobacteria_42_16 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_14
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16529..17311
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C6T3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS72463.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
LppY/LpqO family protein
SCNpilot_cont_1000_p_scaffold_143_15
unknown

Not on your lists

17416..17595
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_16

Not on your lists

17693..19912
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EVA1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09579.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_cont_1000_p_scaffold_143_17
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19915..20619
DNA (705bp) protein (235aa)
Outer membrane lipoprotein-sorting protein id=3710575 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Outer membrane lipoprotein-sorting protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20633..20962)
DNA (330bp) protein (110aa)
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase n=1 Tax=uncultured bacterium RepID=K2EIF4_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20950..21204)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGN0_9BACT
transcriptional regulator/antitoxin MazE; K07172 antitoxin
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_20
unknown

Not on your lists

comp(21335..22213)
DNA (879bp) protein (293aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_21
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22675..26061
DNA (3387bp) protein (1129aa)
acylglycerophosphoethanolamine acyltransferase (EC:6.2.1.20); K05939 acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
AMP-dependent synthetase and ligase id=3443398 bin=GWC2_Alphaproteobacteria_42_16 species=Nitrosomonas eutropha genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_22
Genlisea aurea, Genlisea, Lamiales, asterids, Streptophyta, Viridiplantae

Not on your lists

comp(26078..26401)
DNA (324bp) protein (108aa)
Addiction module antidote protein (Fragment) n=1 Tax=Genlisea aurea RepID=S8DEG4_9LAMI
Addiction module antidote protein {ECO:0000313|EMBL:EPS57787.1}; Flags: Fragment;; TaxID=192259 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea.;" source="Genlisea aurea.;"
addiction module antidote protein
SCNpilot_cont_1000_p_scaffold_143_23
unknown

Not on your lists

comp(26852..27019)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_24
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27178..28074)
DNA (897bp) protein (299aa)
GTPase Era n=1 Tax=uncultured bacterium RepID=K2DV90_9BACT rbh
era; GTP-binding protein; K03595 GTP-binding protein Era
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_25

Not on your lists

comp(28067..28786)
DNA (720bp) protein (240aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 id=3710700 bin=GWC2_Alphaproteobacteria_42_16 species=Roseibium sp. TrichSKD4 genus=Roseibium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
SCNpilot_cont_1000_p_scaffold_143_26

Not on your lists

comp(28738..29499)
DNA (762bp) protein (254aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I id=3710703 bin=GWC2_Alphaproteobacteria_42_16 species=Methylocella silvestris genus=Methylocella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
SCNpilot_cont_1000_p_scaffold_143_27
Mycobacterium orygis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29682..32063)
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1B2
PE-PGRS family protein
Uncharacterized protein {ECO:0000313|EMBL:EMT37122.1}; TaxID=1305739 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium orygis 112400015.;"
SCNpilot_cont_1000_p_scaffold_143_28
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32330..35791
DNA (3462bp) protein (1154aa)
ankyrin and tpr repeat domain protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8E7
Uncharacterized protein {ECO:0000313|EMBL:AIK96338.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_143_29
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36001..36924
DNA (924bp) protein (308aa)
arginase/agmatinase/formiminoglutamase; K01476 arginase [EC:3.5.3.1]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJL2_9BACT rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_30

Not on your lists

36921..38144
DNA (1224bp) protein (408aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rocD; ornithine aminotransferase (EC:2.6.1.13); K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13]
Acetylornithine aminotransferase n=1 Tax=uncultured bacterium RepID=K2DV81_9BACT rbh
Displaying items 1-30 of 183 in total

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