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SCNpilot_cont_1000_p_scaffold_399

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Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_399_1

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137..1063
DNA (927bp) protein (309aa)
Membrane protein n=1 Tax=uncultured bacterium RepID=K2EH84_9BACT rbh
Membrane protein {ECO:0000313|EMBL:EKE08937.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
membrane protein
SCNpilot_cont_1000_p_scaffold_399_2
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

comp(1221..1973)
DNA (753bp) protein (251aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U3A8_DESML
Sel1 domain-containing protein; K07126
Tax=GWA2_OP3_50_21_curated
SCNpilot_cont_1000_p_scaffold_399_3
unknown

Not on your lists

comp(2054..2197)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_4
unknown

Not on your lists

comp(2178..2297)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_5
unknown

Not on your lists

comp(2249..3250)
DNA (1002bp) protein (334aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_6
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3385..3978)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AF68_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
SCNpilot_cont_1000_p_scaffold_399_7
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4000..4521)
DNA (522bp) protein (174aa)
Cupin region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTH6_VARPS
Cupin domain protein {ECO:0000313|EMBL:CDZ79324.1}; Flags: Precursor;; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
cupin region
SCNpilot_cont_1000_p_scaffold_399_8

Not on your lists

comp(4605..5144)
DNA (540bp) protein (180aa)
cytochrome B561 n=1 Tax=Legionella tunisiensis RepID=UPI00036612C6
Cytochrome b561 transmembrane protein {ECO:0000313|EMBL:EKD54469.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
yceJ; cytochrome b561; K12262 cytochrome b561
SCNpilot_cont_1000_p_scaffold_399_9

Not on your lists

comp(5222..6730)
DNA (1509bp) protein (503aa)
amn; AMP nucleosidase (EC:3.2.2.4); K01241 AMP nucleosidase [EC:3.2.2.4] rbh
AMP nucleosidase id=4742447 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE08938.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_399_10
unknown

Not on your lists

comp(6748..7053)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7057..7950)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EUQ6_9BACT rbh
30S ribosomal protein S6; K05844 ribosomal protein S6 modification protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_399_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7998..8450)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FFG2_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_399_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8447..8812)
DNA (366bp) protein (122aa)
Histidine triad (HIT) protein n=1 Tax=uncultured bacterium RepID=K2DU82_9BACT
HIT-like protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_399_14

Not on your lists

8898..9455
DNA (558bp) protein (186aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hslV; ATP-dependent protease peptidase subunit (EC:3.4.25.1); K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV n=1 Tax=uncultured bacterium RepID=K2EIV9_9BACT
SCNpilot_cont_1000_p_scaffold_399_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9459..10775
DNA (1317bp) protein (439aa)
ATP-dependent protease ATPase subunit HslU id=4384001 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
hslU; ATPase and chaperone, component of the HslUV proteasome; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_399_16
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10964..11479
DNA (516bp) protein (172aa)
GNAT family acetyltransferase n=4 Tax=Bacillus thuringiensis RepID=J4A5H6_BACTU
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EAO54879.1}; TaxID=339854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar israelensis ATCC 35646.;"
GNAT family acetyltransferase
SCNpilot_cont_1000_p_scaffold_399_17
R_Gammaproteobacteria_41_20, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11501..12697)
DNA (1197bp) protein (399aa)
Bicyclomycin resistance protein (Bcr2) id=3529371 bin=GWA1_Alphaproteobacteria_45_9 species=unknown genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small rbh
MFS-type bicyclomycin resistance protein; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_20_curated
SCNpilot_cont_1000_p_scaffold_399_18
unknown

Not on your lists

12965..13144
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_19
unknown

Not on your lists

13193..13570
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_20
unknown

Not on your lists

13640..13840
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_21

Not on your lists

comp(13873..15675)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EHA7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE08957.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_1000_p_scaffold_399_22

Not on your lists

comp(15665..15955)
DNA (291bp) protein (97aa)
Protein implicated in iron transport id=2979086 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Protein implicated in iron transport {ECO:0000313|EMBL:EKE08958.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NDAI0G00790; hypothetical protein
SCNpilot_cont_1000_p_scaffold_399_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16119..17615)
DNA (1497bp) protein (499aa)
sensory transduction histidine kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E77
PAS domain S-box {ECO:0000313|EMBL:KCZ71451.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative PAS sensor signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_399_24

Not on your lists

17875..18495
DNA (621bp) protein (207aa)
ATPase or kinase n=1 Tax=uncultured bacterium RepID=K2EHV7_9BACT
ATPase or kinase {ECO:0000313|EMBL:EKE09082.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATPase or kinase; K06925 UPF0079 ATP-binding protein
SCNpilot_cont_1000_p_scaffold_399_25
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18449..19459
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DT81_9BACT rbh
Aminoglycoside phosphotransferase; K07102
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_399_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19607..20293
DNA (687bp) protein (229aa)
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=uncultured bacterium RepID=K2FEL8_9BACT
nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_399_27

Not on your lists

comp(20583..21020)
DNA (438bp) protein (146aa)
Translation initiation factor IF-3 n=1 Tax=uncultured bacterium RepID=K2DVK5_9BACT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
SCNpilot_cont_1000_p_scaffold_399_28
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21118..23076)
DNA (1959bp) protein (653aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
threonyl-tRNA synthetase id=4384011 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_399_29
unknown

Not on your lists

comp(23413..23577)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_399_30
unknown

Not on your lists

comp(23897..24121)
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying items 1-30 of 149 in total

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