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SCNpilot_cont_1000_p_scaffold_507

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_507_1
Penicillium digitatum, Penicillium, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(1..795)
DNA (795bp) protein (265aa)
cell division protein n=1 Tax=Pseudoalteromonas sp. NJ631 RepID=UPI00031F06C1
Uncharacterized protein {ECO:0000313|EMBL:EKV11150.1}; TaxID=1170229 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.;" source="Penicillium digitatum (strain PHI26 / CECT 20796) (Green mold).;"
10.t00039; hypothetical protein
SCNpilot_cont_1000_p_scaffold_507_2
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

Not on your lists

comp(1001..2887)
DNA (1887bp) protein (629aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9V7X2_RHIID
Skt5p {ECO:0000313|EMBL:EXX62626.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_507_3

Not on your lists

comp(3058..4185)
DNA (1128bp) protein (376aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] rbh
Alanine dehydrogenase id=4886484 bin=GWC2_Alphaproteobacteria_42_16 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
SCNpilot_cont_1000_p_scaffold_507_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4320..5633
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVQ8_9BACT rbh
Co2 transporter containing CBS domains rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5563..5847)
DNA (285bp) protein (95aa)
Transcriptional regulator, BolA protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW2_NITHX
BolA-like protein; K05527 BolA protein
BolA family transcriptional regulator {ECO:0000313|EMBL:KJC60488.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_1000_p_scaffold_507_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6082..6831)
DNA (750bp) protein (250aa)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase id=4896253 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_7
unknown

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6967..9846
DNA (2880bp) protein (960aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_507_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10065..11204
DNA (1140bp) protein (380aa)
ABC-type uncharacterized transport system id=4896252 bin=GWC2_Alphaproteobacteria_42_16 species=Brassica rapa genus=Brassica taxon_order=Brassicales taxon_class=unknown phylum=Streptophyta tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_9

Not on your lists

11213..11983
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=4896251 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE10442.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K11918 type VI secretion system protein
SCNpilot_cont_1000_p_scaffold_507_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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11993..13342
DNA (1350bp) protein (450aa)
hypothetical protein COdytL_02095 id=4896250 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_11

Not on your lists

13445..14218
DNA (774bp) protein (258aa)
Putative Uncharacterized protein conserved in bacteria id=4896249 bin=GWC2_Alphaproteobacteria_42_16 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE10444.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K11892 type VI secretion system protein ImpK
SCNpilot_cont_1000_p_scaffold_507_12

Not on your lists

14232..18446
DNA (4215bp) protein (1405aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FHY6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE10445.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K11891 type VI secretion system protein ImpL rbh
SCNpilot_cont_1000_p_scaffold_507_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18434..19513
DNA (1080bp) protein (360aa)
Putative uncharacterized protein id=4896247 bin=GWC2_Alphaproteobacteria_42_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_14
unknown

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comp(19564..20100)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_507_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21005..21541)
DNA (537bp) protein (179aa)
Cold shock-like protein CspA id=4896246 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
cspA; cold shock-like protein CspA; K03704 cold shock protein (beta-ribbon, CspA family)
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_16
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22079..22402
DNA (324bp) protein (108aa)
id=4896245 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_17
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22524..23459)
DNA (936bp) protein (312aa)
Drug/metabolite exporter family protein n=1 Tax=uncultured bacterium RepID=K2EXY1_9BACT rbh
drug/metabolite exporter family protein; K15270 S-adenosylmethionine uptake transporter
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23459..24457)
DNA (999bp) protein (333aa)
Transporter, drug/metabolite exporter family id=4896243 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
drug/metabolite exporter family protein; K15270 S-adenosylmethionine uptake transporter
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_19
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24640..24906)
DNA (267bp) protein (89aa)
Ribbon-helix-helix protein, copG family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VQ77_9CYAN
Ribbon-helix-helix protein, copG family {ECO:0000313|EMBL:EDX76031.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_507_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25222..27924
DNA (2703bp) protein (901aa)
Protein translocase subunit SecA n=1 Tax=uncultured bacterium RepID=K2DVJ2_9BACT rbh
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_21
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28041..28448
DNA (408bp) protein (136aa)
Hypothetical conserved protein id=4886479 bin=GWC2_Alphaproteobacteria_42_16 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_22

Not on your lists

28458..28952
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EHU4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09743.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_507_23
unknown

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comp(29038..29973)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_507_24
unknown

Not on your lists

30108..31106
DNA (999bp) protein (333aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_507_25
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31245..32060
DNA (816bp) protein (272aa)
ATPase MipZ id=4886477 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
chromosome partitioning protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_26

Not on your lists

32264..32680
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FG88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09745.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_507_27
unknown

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32901..33269
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_507_28

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comp(33299..34804)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FFF8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09425.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD-dependent aldehyde dehydrogenase
SCNpilot_cont_1000_p_scaffold_507_29
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34880..35755
DNA (876bp) protein (292aa)
Putative esterase/lipase/thioesterase family protein id=4384003 bin=GWC2_Alphaproteobacteria_42_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_507_30

Not on your lists

36255..37193
DNA (939bp) protein (313aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thyX; Thymidylate synthase; K03465 thymidylate synthase (FAD) [EC:2.1.1.148]
Thymidylate synthase ThyX n=1 Tax=uncultured bacterium RepID=K2FEM8_9BACT rbh
Displaying items 1-30 of 51 in total

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