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SCNpilot_cont_1000_p_scaffold_605

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_605_1

Not on your lists

243..1244
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EI53_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09883.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acriflavin resistance periplasmic protein
SCNpilot_cont_1000_p_scaffold_605_2

Not on your lists

1450..4527
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EW67_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09884.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hydrophobic/amphiphilic exporter-1
SCNpilot_cont_1000_p_scaffold_605_3
unknown

Not on your lists

comp(4737..5198)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_4
unknown

Not on your lists

5440..5919
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_5

Not on your lists


comp(5950..7473)
DNA (1524bp) protein (508aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Methionine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EJU4_9BACT rbh
metG; methionyl-tRNA synthetase
SCNpilot_cont_1000_p_scaffold_605_6
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7505..9001)
DNA (1497bp) protein (499aa)
Uncharacterized protein {ECO:0000313|EMBL:AIK96634.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
SCNpilot_cont_1000_p_scaffold_605_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9043..9984)
DNA (942bp) protein (314aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
ATPase involved in DNA replication id=4940898 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_8
unknown

Not on your lists

comp(10158..11330)
DNA (1173bp) protein (391aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_9
unknown

Not on your lists

11675..12886
DNA (1212bp) protein (404aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12985..13530
DNA (546bp) protein (182aa)
isopentenyl-diphosphate delta-isomerase, type 1 (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]
Isopentenyl-diphosphate delta-isomerase n=1 Tax=uncultured bacterium RepID=K2FHN6_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_11
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13635..14852)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=6 Tax=Legionella pneumophila RepID=Q5X209_LEGPA
Putative to nasA protein {ECO:0000313|EMBL:CEG56913.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
smlA_phtK; putative to nasA protein
SCNpilot_cont_1000_p_scaffold_605_12

Not on your lists

15471..17450
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXK3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE10314.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
pbp; penicillin binding protein rbh
SCNpilot_cont_1000_p_scaffold_605_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17403..18023)
DNA (621bp) protein (207aa)
tdk; thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase n=1 Tax=uncultured bacterium RepID=K2EJD5_9BACT rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_14
unknown

Not on your lists

comp(18082..18336)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_15
unknown

Not on your lists

18809..18964
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_16
unknown

Not on your lists

comp(19256..19495)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_17
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19710..20384
DNA (675bp) protein (225aa)
cynT; carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase id=4364462 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Midichloria mitochondrii genus=Candidatus Midichloria taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_18
R_Alphaproteobacteria_41_14, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20376..21581)
DNA (1206bp) protein (402aa)
Bcr/CflA subfamily drug resistance transporter id=2439562 bin=GWA1_Alphaproteobacteria_45_9 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
SCNpilot_cont_1000_p_scaffold_605_19
unknown

Not on your lists

22169..22600
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_20
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22963..23865
DNA (903bp) protein (301aa)
Leucine-rich repeat (LRR) protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WFB6_9CYAN
Leucine-rich repeat-containing protein 1 {ECO:0000313|EMBL:KIC73499.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_605_21
R_Coxiella_44_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24016..24495)
DNA (480bp) protein (160aa)
Sulfurtransferase id=3632886 bin=GWF2_Melainabacteria_37_15 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
rhodanese-related sulfurtransferase
Tax=RIFCSPHIGHO2_12_FULL_Coxiella_44_14_curated
SCNpilot_cont_1000_p_scaffold_605_22
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24771..25688
DNA (918bp) protein (306aa)
Rare lipoprotein A id=4940931 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
lipoprotein; K03642 rare lipoprotein A
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_23

Not on your lists

25702..26853
DNA (1152bp) protein (384aa)
Serine-type D-Ala-D-Ala carboxypeptidase id=4940930 bin=GWC2_Alphaproteobacteria_42_16 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09713.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dacA; serine-type D-Ala-D-Ala carboxypeptidase rbh
SCNpilot_cont_1000_p_scaffold_605_24
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26850..27485
DNA (636bp) protein (212aa)
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase id=4940929 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_25
unknown

Not on your lists

27568..29277
DNA (1710bp) protein (570aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29690..32137)
DNA (2448bp) protein (816aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=uncultured bacterium RepID=K2EL92_9BACT rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_27
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32154..33320)
DNA (1167bp) protein (389aa)
DNA replication and repair protein RecF n=1 Tax=uncultured bacterium RepID=K2EJD9_9BACT rbh
recF; DNA replication and repair protein recF
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_605_28
unknown

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comp(33461..34036)
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_605_29

Not on your lists

comp(34165..35985)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXK6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE10319.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
typA; GTP-binding protein TypA; K06207 GTP-binding protein
SCNpilot_cont_1000_p_scaffold_605_30

Not on your lists

36165..37868
DNA (1704bp) protein (568aa)
xenobiotic-transporting ATPase (EC:3.6.3.44); K02471 putative ATP-binding cassette transporter
ABC transporter domain protein id=4937262 bin=GWC2_Alphaproteobacteria_42_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE10320.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 39 in total

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