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SCNpilot_cont_1000_p_scaffold_803

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_803_1
unknown

Not on your lists

comp(2..598)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_803_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1229..3163)
DNA (1935bp) protein (645aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DUH6_9BACT
conjugative transfer protein TraD
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3293..4045)
DNA (753bp) protein (251aa)
hypothetical protein COdytL_11899 id=4756831 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4051..5931)
DNA (1881bp) protein (627aa)
hypothetical protein COdytL_11899 id=4756831 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traG; conjugative transfer protein traG; K12056 conjugal transfer mating pair stabilization protein TraG
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6068..7453)
DNA (1386bp) protein (462aa)
hypothetical protein COdytL_11894 id=4756830 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traH; protein TraH; K12072 conjugative transfer pilus assembly protein TraH
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_6

Not on your lists

comp(7450..8325)
DNA (876bp) protein (292aa)
TraF-like protein id=4756829 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE08837.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TraF-like protein; K12057 conjugal transfer pilus assembly protein TraF
SCNpilot_cont_1000_p_scaffold_803_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8322..9182)
DNA (861bp) protein (287aa)
Conjugative transfer protein TraN n=1 Tax=uncultured bacterium RepID=K2DSF7_9BACT
conjugative transfer protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9331..10062)
DNA (732bp) protein (244aa)
conjugative transfer protein TraN id=4756828 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_9

Not on your lists

comp(10148..12034)
DNA (1887bp) protein (629aa)
conjugative transfer protein TraN id=4756828 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Conjugative transfer protein TraN {ECO:0000313|EMBL:EKE08836.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugative transfer protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN
SCNpilot_cont_1000_p_scaffold_803_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12031..12774)
DNA (744bp) protein (248aa)
Sex pilus assembly and mating pair formation protein id=4756827 bin=GWC2_Alphaproteobacteria_42_16 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
type-F conjugative transfer system pilin assembly protein TrbC; K12059 conjugal transfer pilus assembly protein TrbC
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12759..13997)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ET09_9BACT rbh
traU; conjugal DNA transfer protein TraU; K12060 conjugal transfer pilus assembly protein TraU
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13994..14617)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EFJ4_9BACT
hypothetical protein; K12061 conjugal transfer pilus assembly protein TraW
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14592..15263)
DNA (672bp) protein (224aa)
Type IV secretory pathway protease TraF-like protein id=4756797 bin=GWC2_Alphaproteobacteria_42_16 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
conjugative transfer signal peptidase TraF; K12062 conjugal transfer pilin signal peptidase TrbI
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15260..17728)
DNA (2469bp) protein (823aa)
putative inner-membrane protein traC id=4756796 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traC; inner-membrane protein traC; K12063 conjugal transfer ATP-binding protein TraC
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..18137)
DNA (429bp) protein (143aa)
id=4756795 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_16
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18115..19383)
DNA (1269bp) protein (423aa)
putative conjugative transfer protein TraB id=4756794 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
conjugal transfer protein TraB
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_17
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19361..20065)
DNA (705bp) protein (235aa)
id=4756793 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20055..20615)
DNA (561bp) protein (187aa)
Type IV conjugative transfer system protein TraE id=4756792 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traE; F pilus assembly protein traE; K12067 conjugal transfer pilus assembly protein TraE
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20612..20902)
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=4756791 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_803_20
unknown

Not on your lists

comp(20914..21213)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_803_21
Wolbachia endosymbiont of Culex quinquefasciatus, Wolbachia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21213..21824)
DNA (612bp) protein (204aa)
single-stranded DNA-binding protein n=1 Tax=Wolbachia endosymbiont of Diaphorina citri RepID=UPI0002E534DD
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=570417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.;" source="Wolbachia pipientis subsp. Culex pipiens (strain wPip).;"
SCNpilot_cont_1000_p_scaffold_803_22

Not on your lists

comp(21887..23308)
DNA (1422bp) protein (474aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EJV1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10503.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_803_23

Not on your lists

comp(23305..23880)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FI06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10465.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_803_24

Not on your lists

comp(24088..24372)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJ62_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09527.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_803_25

Not on your lists

24486..24956
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EH87_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09528.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_803_26

Not on your lists

comp(24953..27307)
DNA (2355bp) protein (785aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DVH3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09706.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_803_27

Not on your lists

comp(27342..28136)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FHJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10250.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_803_28

Not on your lists

comp(28133..28894)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FHJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10250.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_803_29
unknown

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29467..29637
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_803_30

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29741..30274
DNA (534bp) protein (178aa)
Cold shock-like protein CspA id=4896246 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Cold shock-like protein CspA {ECO:0000313|EMBL:EKE10447.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
Displaying items 1-30 of 38 in total

View Taxonomy