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SCNpilot_cont_1000_p_scaffold_813

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_813_1
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193..576)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI000372021F
Uncharacterized protein {ECO:0000313|EMBL:CEG57261.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_813_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(740..2278)
DNA (1539bp) protein (513aa)
Nucleotide transport protein id=4468775 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Protochlamydia amoebophila genus=Candidatus Protochlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
ntt_1; ADP/ATP translocase; K03301 ATP:ADP antiporter, AAA family rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_3
unknown

Not on your lists

comp(2388..2792)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_4

Not on your lists

2874..4307
DNA (1434bp) protein (478aa)
Carbohydrate kinase id=4468866 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09232.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conserved protein of unknown function; putative Carbohydrate kinase domain
SCNpilot_cont_1000_p_scaffold_813_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4479..5177
DNA (699bp) protein (233aa)
id=4468867 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_6

Not on your lists

comp(5191..5763)
DNA (573bp) protein (191aa)
Uncharacterized protein id=4468868 bin=GWC2_Alphaproteobacteria_42_16 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
UbiA prenyltransferase:PepSY-associated TM helix {ECO:0000313|EMBL:EKE09234.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_813_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5754..6134)
DNA (381bp) protein (127aa)
id=4468869 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_8
unknown

Not on your lists

comp(6292..6861)
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7056..8327
DNA (1272bp) protein (424aa)
exonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit id=4468870 bin=GWC2_Alphaproteobacteria_42_16 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8437..8739
DNA (303bp) protein (101aa)
Integration host factor subunit alpha n=1 Tax=uncultured bacterium RepID=K2EIE0_9BACT
ihfA; integration host factor subunit alpha
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_11
unknown

Not on your lists

8752..9438
DNA (687bp) protein (229aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_12
unknown

Not on your lists

9780..11162
DNA (1383bp) protein (461aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_13
R_Coxiella_44_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11208..12257)
DNA (1050bp) protein (350aa)
Fic n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UJY0_RICFE rbh
fic; Fic family protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Coxiella_44_14_curated
SCNpilot_cont_1000_p_scaffold_813_14
unknown

Not on your lists

comp(12357..12704)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12908..13492)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ER19_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05671.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_813_16

Not on your lists

13868..14653
DNA (786bp) protein (262aa)
Sec-independent protein translocase protein TatC n=1 Tax=uncultured bacterium RepID=K2EIC7_9BACT rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Twin-arginine translocation protein TatC
SCNpilot_cont_1000_p_scaffold_813_17

Not on your lists

14610..15893
DNA (1284bp) protein (428aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EGK9_9BACT rbh
SCNpilot_cont_1000_p_scaffold_813_18

Not on your lists

16153..17298
DNA (1146bp) protein (382aa)
Putative gamma-D-glutamyl-meso-diaminopimelate peptidase id=4468757 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Peptidase M23 {ECO:0000313|EMBL:EKE09224.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ygeR; Membrane protein
SCNpilot_cont_1000_p_scaffold_813_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17337..17756
DNA (420bp) protein (140aa)
Protein translocase subunit yajC id=4468761 bin=GWC2_Alphaproteobacteria_42_16 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
protein translocase subunit yajC; K03210 preprotein translocase subunit YajC
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17775..19334
DNA (1560bp) protein (520aa)
Preprotein translocase subunit SecD id=4468765 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_21
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19348..20271
DNA (924bp) protein (308aa)
protein-export membrane protein SecF id=4468768 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_22
unknown

Not on your lists

comp(20340..20765)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_23
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21242..22228)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FG43_9BACT
cell filamentation protein Fic
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_813_24
unknown

Not on your lists

23620..24156
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_25
unknown

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24543..24959
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_813_26

Not on your lists

25394..25855
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Acanthocystis turfacea Chlorella virus MN0810.1 RepID=M1HZE8_9PHYC
Uncharacterized protein {ECO:0000313|EMBL:KKM90802.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_813_27

Not on your lists

25903..26616
DNA (714bp) protein (238aa)
Bifunctional protein GlmU {ECO:0000313|EMBL:KER07000.1}; EC=2.6.1.37 {ECO:0000313|EMBL:KER07000.1};; TaxID=1502292 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-E16.;"
Uncharacterized protein n=1 Tax=Acanthocystis turfacea Chlorella virus MN0810.1 RepID=M1H9H9_9PHYC
phosphatase/phosphohexomutase
SCNpilot_cont_1000_p_scaffold_813_28
GWA2_OP11_43_10, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

26613..26939
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS79554.1}; TaxID=1618369 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWA2_43_10.;"
Uncharacterized protein id=2278611 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Nitrosoarchaeum limnia genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
SCNpilot_cont_1000_p_scaffold_813_29
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

26890..27678
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Synechococcus phage S-SSM7 RepID=M4PYT8_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:ADO98302.1}; TaxID=445686 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SSM7.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_813_30
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27681..28610
DNA (930bp) protein (310aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Clostridium sp. CAG:43 RepID=R7ADN5_9CLOT
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDD58923.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Glycosyltransferases involved in cell wall biogenesis
Displaying items 1-30 of 39 in total

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