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SCNpilot_cont_1000_p_scaffold_1354

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1354_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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188..3451
DNA (3264bp) protein (1088aa)
ankyrin and tpr repeat domain protein id=4649249 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Ankyrin repeat domain protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1354_2

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3461..6517
DNA (3057bp) protein (1019aa)
ankyrin and tpr repeat domain protein id=4649249 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKE10469.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ankyrin and tpr repeat domain-containing protein
SCNpilot_cont_1000_p_scaffold_1354_3
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6920..7405
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0W3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV41427.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
SCNpilot_cont_1000_p_scaffold_1354_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7717..7977)
DNA (261bp) protein (87aa)
Conjugal transfer protein TraD id=4537104 bin=GWC2_Alphaproteobacteria_42_16 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1354_5

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8004..9260
DNA (1257bp) protein (419aa)
MobA/MobL protein n=1 Tax=uncultured bacterium RepID=K2FFA3_9BACT
MobA/MobL protein {ECO:0000313|EMBL:EKE09345.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
MobA/MobL protein
SCNpilot_cont_1000_p_scaffold_1354_6
unknown

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9631..9804
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_7
unknown

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9888..10991
DNA (1104bp) protein (368aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_8

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11382..11720
DNA (339bp) protein (113aa)
hypothetical protein id=71756 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD65482.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1354_9

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11720..12007
DNA (288bp) protein (96aa)
helix-turn-helix domain protein; K07726 putative transcriptional regulator id=71758 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD65483.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K07726 putative transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1354_10
unknown

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12114..12242
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_11
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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comp(12468..16184)
DNA (3717bp) protein (1239aa)
hypothetical protein n=3 Tax=Vibrio splendidus RepID=UPI0002E04050
Skt5p {ECO:0000313|EMBL:EXX60491.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1354_12
unknown

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17149..17460
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_13
unknown

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comp(17634..18788)
DNA (1155bp) protein (385aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_14
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19196..20284)
DNA (1089bp) protein (363aa)
Putative uncharacterized protein id=1896106 bin=GWE2_Gammaproteobacteria_37_16 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small rbh
hypothetical protein rbh
Tax=GWE2_Gammaproteobacteria_37_16_curated
SCNpilot_cont_1000_p_scaffold_1354_15
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20493..21770)
DNA (1278bp) protein (426aa)
Phage integrase family protein n=4 Tax=Coxiella burnetii RepID=B6J2G7_COXB2 rbh
phage integrase family protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_11_curated
SCNpilot_cont_1000_p_scaffold_1354_16
unknown

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comp(21784..21915)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_17
unknown

Not on your lists

comp(22182..23075)
DNA (894bp) protein (298aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1354_18
unknown

Not on your lists

23542..23688
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 18 items

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