name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_98_1
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(76..738)
|
LuxR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB6E
rbh
Transcriptional regulatory protein DevR (DosR) {ECO:0000313|EMBL:CDZ89099.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
NarL family two-component response regulator
|
|
SCNpilot_cont_1000_p_scaffold_98_2
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(735..2105)
|
histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB6F
rbh
Putative two-component histidine kinase {ECO:0000313|EMBL:CCQ17363.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
sensor kinase, two-component system
rbh
|
|
SCNpilot_cont_1000_p_scaffold_98_3
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2119..3393)
|
alcohol dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB70
rbh
putative alcohol dehydrogenase
rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KDS87633.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3730..4845)
|
xanthine dehydrogenase accessory factor n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB71
rbh
XshC-Cox1-family protein; K07402 xanthine dehydrogenase accessory factor
rbh
XshC-Cox1-family protein {ECO:0000313|EMBL:AEA27866.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4838..5980)
|
VWA containing CoxE family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0R6_PSEUX
rbh
von Willebrand factor A; K07161
rbh
VWA containing CoxE family protein {ECO:0000313|EMBL:AEA27865.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(5984..6880)
|
ATPase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB73
rbh
ATPase
rbh
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEA27864.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7386..8009
|
Transglycosylase-like domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0R4_PSEUX
transglycosylase-like domain-containing protein
Transglycosylase-like domain protein {ECO:0000313|EMBL:AEA27863.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8064..8495)
|
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin biosynthesis MoaE protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0R3_PSEUX
Molybdopterin biosynthesis MoaE protein {ECO:0000313|EMBL:AEA27862.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8492..8968)
|
molybdenum cofactor synthesis protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB76
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:AEA27861.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8965..9444)
|
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0R1_PSEUX
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9834..10451
|
Transglycosylase-like domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0R0_PSEUX
transglycosylase-like domain-containing protein
Transglycosylase-like domain protein {ECO:0000313|EMBL:AEA27859.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(10423..10971)
|
hypothetical protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Q9_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:AEA27858.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(11016..11195)
|
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Q8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27857.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11291..13528
|
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Q7_PSEUX
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA27856.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13525..14124)
|
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Q5_PSEUX
rbh
hypothetical protein; K06945
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA27854.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(14105..14764)
|
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF22B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27853.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(14824..15246)
|
Roadblock/LC7 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Q3_PSEUX
Roadblock/LC7 family protein; K07131
Roadblock/LC7 family protein {ECO:0000313|EMBL:AEA27852.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(15243..18920)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Q2_PSEUX
histidine kinase
|
|
SCNpilot_cont_1000_p_scaffold_98_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19373..21034
|
type III restriction protein res subunit; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12]
rbh
Type III restriction protein res subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Q1_PSEUX
rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:AEA27850.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_20
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21404..22594
|
histidine kinase n=1 Tax=Amycolatopsis nigrescens RepID=UPI000362BE19
rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EHR53272.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
two-component system sensor kinase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_98_21
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
22609..23214
|
LuxR family transcriptional regulator n=1 Tax=Amycolatopsis methanolica RepID=UPI0003716BE4
rbh
Response regulator, two-component system {ECO:0000313|EMBL:AIJ25516.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
liaR; two-component system response regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_98_22
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23337..24146
|
Branched-chain amino acid ABC transporter ATPase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IBM0_9PSEU
rbh
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:EOD67809.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
livF; branched-chain amino acid transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_98_23
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24143..24943
|
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036DEFF0
rbh
Uncharacterized protein {ECO:0000313|EMBL:AIG79011.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
livG; branched-chain amino acid transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_98_24
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24943..25821
|
branched-chain amino acid ABC transporter permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262767C
rbh
livH; branched-chain amino acid transport system permease protein
rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFZ77592.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
|
|
SCNpilot_cont_1000_p_scaffold_98_25
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25814..26968
|
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PJI0_9PSEU
rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AJK55440.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
livM; branched-chain amino acid transport system permease protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_98_26
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26968..28227
|
Periplasmic substrate-binding component of ABC-type branched-chain amino acid transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8I4X0_AMYMU
rbh
branched chain amino acid ABC transporter substrate-binding protein
rbh
Branched-chain amino acid ABC transporter periplasmic protein {ECO:0000313|EMBL:AEK45688.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
28532..28750
|
Phage shock protein C, PspC n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0P8_PSEUX
phage shock protein C, PspC
Phage shock protein C, PspC {ECO:0000313|EMBL:AEA27847.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28754..29959)
|
Low temperature requirement A n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0P7_PSEUX
rbh
low temperature requirement A
rbh
Low temperature requirement A {ECO:0000313|EMBL:AEA27846.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
|
|
SCNpilot_cont_1000_p_scaffold_98_29
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(30102..30680)
|
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LWE9_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KDE14549.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_98_30
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
30743..31735
|
Putative DeoR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BA85_RHOOB
rbh
DeoR family transcriptional regulator
rbh
Putative DeoR family transcriptional regulator {ECO:0000313|EMBL:BAH52588.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
|