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SCNpilot_cont_1000_p_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_393_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(202..1620)
DNA (1419bp) protein (473aa)
Aminoglycoside phosphotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX0_PSEUX rbh
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEA23963.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1617..3347)
DNA (1731bp) protein (577aa)
trehalose synthase; K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16] rbh
Trehalose synthase {ECO:0000313|EMBL:AEA23964.1}; EC=5.4.99.16 {ECO:0000313|EMBL:AEA23964.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Trehalose synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX1_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_393_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3772..5742)
DNA (1971bp) protein (657aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX2_PSEUX rbh
alpha amylase rbh
SCNpilot_cont_1000_p_scaffold_393_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5971..8535
DNA (2565bp) protein (855aa)
alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1] rbh
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Phosphorylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX3_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_393_5
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8580..8918)
DNA (339bp) protein (113aa)
Lectin n=23 Tax=Mycobacterium abscessus RepID=S9ZPD1_MYCAB
putative mannose-specific lectin
Putative mannose-specific lectin {ECO:0000313|EMBL:CRG60276.1}; TaxID=36809 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium abscessus.;"
SCNpilot_cont_1000_p_scaffold_393_6
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9058..9267)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Nocardiopsis prasina RepID=UPI000376BE30
regulatory , FmdB family domain protein
Regulatory , FmdB family domain protein {ECO:0000313|EMBL:AFR07456.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
SCNpilot_cont_1000_p_scaffold_393_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9538..11547)
DNA (2010bp) protein (670aa)
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Glycogen debranching enzyme GlgX n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX5_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_393_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11610..12446
DNA (837bp) protein (279aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX6_PSEUX rbh
ABC transporter related protein {ECO:0000313|EMBL:AEA23969.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12543..13322
DNA (780bp) protein (260aa)
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] rbh
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX7_PSEUX rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EWM16222.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_393_10
unknown

Not on your lists

comp(13326..13445)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_393_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13616..14569
DNA (954bp) protein (318aa)
Methyltransferase type 11 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX8_PSEUX rbh
type 11 methyltransferase rbh
Methyltransferase type 11 {ECO:0000313|EMBL:AEA23971.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14613..15752
DNA (1140bp) protein (380aa)
Putative signal transduction histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKX9_PSEUX rbh
signal transduction histidine kinase rbh
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEA23972.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15728..16372
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKY0_PSEUX rbh
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA23973.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_14
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(16406..16921)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Plasmodium falciparum (isolate 3D7) RepID=Q8I207_PLAF7
Plasmodium exported protein (PHISTb), unknown function
Uncharacterized protein {ECO:0000313|EMBL:CAD49108.1}; TaxID=36329 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="Plasmodium falciparum (isolate 3D7).;"
SCNpilot_cont_1000_p_scaffold_393_15
unknown

Not on your lists

16999..17460
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_393_16
unknown

Not on your lists

17457..18059
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_393_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18450..19370)
DNA (921bp) protein (307aa)
inosine/uridine-preferring nucleoside hydrolase; K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-] rbh
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMN5_PSEUX rbh
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:AEA24402.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_18
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19367..20188)
DNA (822bp) protein (274aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000376313F rbh
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_cont_1000_p_scaffold_393_19
unknown

Not on your lists

comp(20220..20432)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_393_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20484..21242
DNA (759bp) protein (253aa)
Acetyltransferase (Isoleucine patch superfamily)-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKY3_PSEUX rbh
acetyltransferase (isoleucine patch superfamily)-like protein rbh
Acetyltransferase (Isoleucine patch superfamily)-like protein {ECO:0000313|EMBL:AEA23976.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_21
unknown

Not on your lists

21317..21475
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_393_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21477..22733)
DNA (1257bp) protein (419aa)
Glycosyl transferase group 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMJ3_PSEUX rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA23977.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22811..23551
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMK4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23988.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_24
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23626..24600)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036EAF7C rbh
SnoK-like protein {ECO:0000313|EMBL:CCQ16438.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
SnoK-like protein rbh
SCNpilot_cont_1000_p_scaffold_393_25
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24597..25370)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000378B4AA
Uncharacterized protein {ECO:0000313|EMBL:AJW40835.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
SCNpilot_cont_1000_p_scaffold_393_26
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25481..26347
DNA (867bp) protein (289aa)
Ubiquinone biosynthesis O-methyltransferase {ECO:0000313|EMBL:KJU99977.1}; EC=2.1.1.222 {ECO:0000313|EMBL:KJU99977.1};; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
Aureobasidin A1 biosynthesis complex n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DHQ3_9NOCA
SCNpilot_cont_1000_p_scaffold_393_27
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26438..28048
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036296E9 rbh
Peptidase {ECO:0000313|EMBL:KDN21694.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_393_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28037..29503)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMK5_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23989.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_393_29
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29598..30305)
DNA (708bp) protein (236aa)
SAM-dependent methlyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE499 rbh
UbiE/COQ5 methyltransferase family protein {ECO:0000313|EMBL:EKF24269.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_393_30
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30432..31355
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037B79B5
Integrase family protein {ECO:0000313|EMBL:CCH86977.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
integrase family protein
Displaying items 1-30 of 108 in total

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