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SCNpilot_cont_1000_p_scaffold_537

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_537_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..190
DNA (189bp) protein (63aa)
Cytochrome c oxidase, subunit I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUA3_PSEUX
cytochrome c oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:AEA24562.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_537_2
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(511..1476)
DNA (966bp) protein (322aa)
TrkA-N domain-containing protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5V811_STRCU rbh
TrkA-N domain-containing protein rbh
TrkA-N domain-containing protein {ECO:0000313|EMBL:AGS73716.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
SCNpilot_cont_1000_p_scaffold_537_3
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1563..2168)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268EE
Uncharacterized protein {ECO:0000313|EMBL:AIJ24077.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
Antibiotic biosynthesis monooxygenase
SCNpilot_cont_1000_p_scaffold_537_4
unknown

Not on your lists

2355..2576
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_537_5
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2712..3707
DNA (996bp) protein (332aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:CEL19765.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CEL19765.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003664464
SCNpilot_cont_1000_p_scaffold_537_6
unknown

Not on your lists

3864..4193
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_537_7
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4190..5047
DNA (858bp) protein (286aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:CEL19765.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CEL19765.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Uncharacterized protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z354_9PSEU
SCNpilot_cont_1000_p_scaffold_537_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5094..6914
DNA (1821bp) protein (607aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
pckG; Phosphoenolpyruvate carboxykinase [GTP] (EC:4.1.1.32) rbh
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KDJ6_SACES rbh
SCNpilot_cont_1000_p_scaffold_537_9
unknown

Not on your lists

comp(7169..7306)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_537_10
unknown

Not on your lists

comp(7719..8033)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_537_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8030..8509)
DNA (480bp) protein (160aa)
carbon-monoxide dehydrogenase; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA28566.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA28566.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTR3_PSEUX
SCNpilot_cont_1000_p_scaffold_537_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8506..9381)
DNA (876bp) protein (292aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] rbh
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA28565.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA28565.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTR2_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_537_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9378..11786)
DNA (2409bp) protein (803aa)
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA28564.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA28564.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTR1_PSEUX rbh
carbon-monoxide dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_537_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11819..14101)
DNA (2283bp) protein (761aa)
Xanthine dehydrogenase {ECO:0000313|EMBL:AEA28563.1}; EC=1.17.1.4 {ECO:0000313|EMBL:AEA28563.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Xanthine dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTR0_PSEUX rbh
xanthine dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_537_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14098..14565)
DNA (468bp) protein (156aa)
xanthine dehydrogenase; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Xanthine dehydrogenase {ECO:0000313|EMBL:AEA28562.1}; EC=1.17.1.4 {ECO:0000313|EMBL:AEA28562.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Xanthine dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTQ9_PSEUX
SCNpilot_cont_1000_p_scaffold_537_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14571..15422)
DNA (852bp) protein (284aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] rbh
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTQ8_PSEUX rbh
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:AEA28561.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_537_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15438..16994)
DNA (1557bp) protein (519aa)
Hydantoinase/oxoprolinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTQ7_PSEUX rbh
hydantoinase/oxoprolinase rbh
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:AEA28560.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_537_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16999..18114)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTQ6_PSEUX rbh
hypothetical protein; K09703 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA28559.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_537_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18111..19109)
DNA (999bp) protein (333aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:AEA28558.1}; EC=1.5.99.11 {ECO:0000313|EMBL:AEA28558.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTQ5_PSEUX rbh
5,10-methylenetetrahydromethanopterin reductase rbh
SCNpilot_cont_1000_p_scaffold_537_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19235..20773
DNA (1539bp) protein (513aa)
Putative transcriptional regulator, PucR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTQ4_PSEUX rbh
PucR family transcriptional regulator rbh
Putative transcriptional regulator, PucR family {ECO:0000313|EMBL:AEA28557.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_537_21
unknown

Not on your lists

comp(20713..21423)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_537_22
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21576..21908
DNA (333bp) protein (111aa)
Predicted protein n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D6A748_9ACTO
Sulfurtransferase {ECO:0000313|EMBL:KES04411.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_537_23
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21905..23278
DNA (1374bp) protein (458aa)
beta-lactamase n=1 Tax=Streptomyces viridosporus RepID=UPI0002D2B341 rbh
Beta-lactamase {ECO:0000313|EMBL:KES04410.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
beta-lactamase domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_537_24
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23275..24150
DNA (876bp) protein (292aa)
Membrane protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XMF5_9ACTO rbh
Membrane protein {ECO:0000313|EMBL:EFL40347.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_537_25
unknown

Not on your lists

24147..24248
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_537_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24347..24565
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M9_PSEUX
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28923.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_537_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24562..26013
DNA (1452bp) protein (484aa)
Multicopper oxidase type 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M8_PSEUX
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AEA28922.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_537_28
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26010..26636
DNA (627bp) protein (209aa)
Methyltransferase type 12 n=1 Tax=Frankia sp. CN3 RepID=G6H790_9ACTO
Methyltransferase domain protein {ECO:0000313|EMBL:EFQ82023.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
SAM binding protein
SCNpilot_cont_1000_p_scaffold_537_29
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26902..27267
DNA (366bp) protein (122aa)
Thioredoxin n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X8Q2_9PSEU
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
thioredoxin
SCNpilot_cont_1000_p_scaffold_537_30
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27399..27998
DNA (600bp) protein (200aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
Carboxymuconolactone decarboxylase n=1 Tax=Rhodococcus opacus M213 RepID=K8XJC6_RHOOP
carboxymuconolactone decarboxylase
Displaying items 1-30 of 105 in total

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