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SCNpilot_cont_1000_p_scaffold_546

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_546_1
Thielavia terrestris, Thielavia, Sordariales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

1..966
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Thielavia terrestris (strain ATCC 38088 / NRRL 8126) RepID=G2QWK5_THITE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEO64780.1}; TaxID=578455 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thielavia.;" source="Thielavia terrestris (strain ATCC 38088 / NRRL 8126) (Acremonium; alabamense).;"
SCNpilot_cont_1000_p_scaffold_546_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1090..5826
DNA (4737bp) protein (1579aa)
NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2] rbh
NAD-glutamate dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N9_PSEUX rbh
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:AEA26951.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_546_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5830..6249
DNA (420bp) protein (140aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N8_PSEUX
Thioesterase superfamily protein {ECO:0000313|EMBL:AEA26950.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_546_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6246..6881
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26949.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_546_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6906..8453)
DNA (1548bp) protein (516aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Alpha amylase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N6_PSEUX rbh
Alpha amylase catalytic region {ECO:0000313|EMBL:AEA26948.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_546_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8483..8866)
DNA (384bp) protein (128aa)
oxygen-binding heme protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF252
globin; K06886 hemoglobin
Hemoglobin {ECO:0000313|EMBL:AIJ21781.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_1000_p_scaffold_546_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9149..10132)
DNA (984bp) protein (328aa)
small mechanosensitive ion channel protein MscS n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF253 rbh
mechanosensitive ion channel MscS; K03442 small conductance mechanosensitive channel rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEA26946.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_546_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10134..12236)
DNA (2103bp) protein (701aa)
prolyl oligopeptidase; K01322 prolyl oligopeptidase [EC:3.4.21.26] rbh
Prolyl oligopeptidase {ECO:0000313|EMBL:AEA26945.1}; EC=3.4.21.26 {ECO:0000313|EMBL:AEA26945.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Prolyl oligopeptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N3_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_546_9
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12349..13035)
DNA (687bp) protein (229aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1N2_PSEUX
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; K07005
Flavin-nucleotide-binding protein {ECO:0000313|EMBL:KGH48402.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
SCNpilot_cont_1000_p_scaffold_546_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13062..14441
DNA (1380bp) protein (460aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SHD7_GEOOG rbh
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ADB77091.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_p_scaffold_546_11
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14496..15377)
DNA (882bp) protein (294aa)
transketolase; K00615 transketolase [EC:2.2.1.1] rbh
transketolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECD0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV01633.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
SCNpilot_cont_1000_p_scaffold_546_12
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15377..16027)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI0003829081 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV01632.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
transketolase
SCNpilot_cont_1000_p_scaffold_546_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16062..16502)
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPY4_PSEUX
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA26167.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_546_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16508..19129)
DNA (2622bp) protein (874aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRG0_PSEUX rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26168.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_546_15
unknown

Not on your lists

19469..19720
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_546_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20067..21686)
DNA (1620bp) protein (540aa)
Putative delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AHH96582.1}; EC=1.2.1.88 {ECO:0000313|EMBL:AHH96582.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] rbh
hypothetical protein n=1 Tax=Saccharomonospora halophila RepID=UPI000375D211 rbh
SCNpilot_cont_1000_p_scaffold_546_17
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21882..23441)
DNA (1560bp) protein (520aa)
transcriptional regulator n=1 Tax=Actinopolyspora mortivallis RepID=UPI00036AEA2A rbh
Transcriptional regulator {ECO:0000313|EMBL:KJK59083.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
transcriptional regulator CdaR rbh
SCNpilot_cont_1000_p_scaffold_546_18
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23534..24436
DNA (903bp) protein (301aa)
proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8] rbh
Proline dehydrogenase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WPY1_ACTMD rbh
Proline dehydrogenase {ECO:0000313|EMBL:ACU35037.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_1000_p_scaffold_546_19
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24443..24643)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HCV6_STRA9
Transcriptional regulator {ECO:0000313|EMBL:EXU92531.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_546_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24876..25721)
DNA (846bp) protein (282aa)
XRE family transcriptional regulator n=1 Tax=Streptomyces RepID=UPI00037BFDC7
Helix-turn-helix protein {ECO:0000313|EMBL:EXG79116.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
chitinase-promoter-binding protein
SCNpilot_cont_1000_p_scaffold_546_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25987..26760
DNA (774bp) protein (258aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK33763.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
SCNpilot_cont_1000_p_scaffold_546_22
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26783..27208)
DNA (426bp) protein (142aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDAB6
PPOX class F420-dependent protein {ECO:0000313|EMBL:CDO09113.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
F420-dependent protein
SCNpilot_cont_1000_p_scaffold_546_23
unknown

Not on your lists

comp(27225..27638)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003674392
hypothetical protein
SCNpilot_cont_1000_p_scaffold_546_24
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27699..29228)
DNA (1530bp) protein (510aa)
Putative fatty-acid--CoA ligase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRE3_BLASD rbh
putative fatty-acid--CoA ligase rbh
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:CCG05425.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_1000_p_scaffold_546_25
unknown

Not on your lists

29405..29581
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P9E8_9ACTO
SCNpilot_cont_1000_p_scaffold_546_26
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29582..30223)
DNA (642bp) protein (214aa)
Isochorismatase hydrolase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1D9_MODMB rbh
Isochorismatase hydrolase rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:CCH89452.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_1000_p_scaffold_546_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30220..32076)
DNA (1857bp) protein (619aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA26787.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA26787.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0J1_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_546_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32078..34120)
DNA (2043bp) protein (681aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA26786.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA26786.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0J0_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_546_29
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34124..34777)
DNA (654bp) protein (218aa)
Transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5D9_9PSEU rbh
Transcriptional regulator {ECO:0000313|EMBL:EHR48940.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_546_30
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34868..35749
DNA (882bp) protein (294aa)
carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002629048 rbh
Isocitrate lyase and phosphorylmutase {ECO:0000313|EMBL:AIJ23420.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase rbh
Displaying items 1-30 of 50 in total

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