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SCNpilot_cont_1000_p_scaffold_914

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_914_1
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035E5C39
Multisubunit Na+/H+ antiporter MrpG {ECO:0000313|EMBL:AHE67233.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
SCNpilot_cont_1000_p_scaffold_914_2
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(520..774)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000377CA1C
Uncharacterized protein {ECO:0000313|EMBL:KJS62020.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein; K05570 multicomponent Na+:H+ antiporter subunit F
SCNpilot_cont_1000_p_scaffold_914_3
unknown

Not on your lists

comp(771..1118)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_914_4
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1154..1909)
DNA (756bp) protein (252aa)
Integrase catalytic region n=1 Tax=Frankia sp. CN3 RepID=G6H346_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AHI00342.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
transposase rbh
SCNpilot_cont_1000_p_scaffold_914_5
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2080..2400)
DNA (321bp) protein (107aa)
Transposase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1K0_MODMB
Transposase {ECO:0000313|EMBL:KGH45689.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
transposase
SCNpilot_cont_1000_p_scaffold_914_6
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2741..3043
DNA (303bp) protein (101aa)
transposase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00038078D4
Mobile element protein {ECO:0000313|EMBL:EMD21703.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
transposase IS3/IS911
SCNpilot_cont_1000_p_scaffold_914_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3730..4095
DNA (366bp) protein (122aa)
Microcompartments protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ16_PSEUX
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:AEA24307.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4105..6273)
DNA (2169bp) protein (723aa)
Putative transcriptional regulator, PucR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ17_PSEUX rbh
PucR family transcriptional regulator rbh
Putative transcriptional regulator, PucR family {ECO:0000313|EMBL:AEA24308.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6294..7328)
DNA (1035bp) protein (345aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ18_PSEUX rbh
molecular chaperone GroES rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:AEA24309.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7339..8724)
DNA (1386bp) protein (462aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Malate dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ19_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_914_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8721..9356)
DNA (636bp) protein (212aa)
Microcompartments protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ20_PSEUX rbh
microcompartments protein rbh
Microcompartments protein {ECO:0000313|EMBL:AEA24311.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9418..10233)
DNA (816bp) protein (272aa)
Ethanolamine utilization protein EutJ family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ21_PSEUX rbh
ethanolamine utilization protein EutJ family protein; K04024 ethanolamine utilization protein EutJ rbh
Ethanolamine utilization protein EutJ family protein {ECO:0000313|EMBL:AEA24312.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10230..11624)
DNA (1395bp) protein (465aa)
Acetaldehyde dehydrogenase (Acetylating) {ECO:0000313|EMBL:AEA24313.1}; EC=1.2.1.10 {ECO:0000313|EMBL:AEA24313.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Acetaldehyde dehydrogenase (Acetylating) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ22_PSEUX rbh
acetaldehyde dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_914_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11672..11998)
DNA (327bp) protein (109aa)
Microcompartments protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ23_PSEUX
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:AEA24314.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12046..12339)
DNA (294bp) protein (98aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ24_PSEUX
ethanolamine utilization protein EutN/carboxysome structural protein Ccml; K04028 ethanolamine utilization protein EutN
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml {ECO:0000313|EMBL:AEA24315.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12514..13527
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKG1_NAKMY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV78723.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_p_scaffold_914_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13532..14461
DNA (930bp) protein (310aa)
haloacid dehalogenase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] rbh
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ26_PSEUX rbh
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:AEA24317.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14454..15191
DNA (738bp) protein (246aa)
Protein tyrosine/serine phosphatase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ27_PSEUX rbh
protein tyrosine/serine phosphatase rbh
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:AEA24318.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15206..17689)
DNA (2484bp) protein (828aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:AEA24319.1}; EC=2.7.9.1 {ECO:0000313|EMBL:AEA24319.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
pyruvate, phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] rbh
Pyruvate, phosphate dikinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ28_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_914_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17686..18306)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ29_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24320.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18410..19840)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ30_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA24321.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_914_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19890..20309)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKH3_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78735.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_p_scaffold_914_23
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21108..22274)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE75B rbh
Uncharacterized protein {ECO:0000313|EMBL:KIH99524.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
major facilitator superfamily protein
SCNpilot_cont_1000_p_scaffold_914_24
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22271..23263)
DNA (993bp) protein (331aa)
Putative TetR family transcriptional regulator n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5UDP9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KEI45883.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_914_25
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23373..24740
DNA (1368bp) protein (456aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHX7_THEM7
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADU51857.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
SCNpilot_cont_1000_p_scaffold_914_26
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24785..25186
DNA (402bp) protein (134aa)
cag pathogenicity island protein Cag15 n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037AF760
Cag pathogenicity island protein Cag15 {ECO:0000313|EMBL:KHK89461.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_1000_p_scaffold_914_27
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25217..25636
DNA (420bp) protein (140aa)
l-carnitine dehydratase/bile acid-inducible protein f (EC:2.8.3.16)
CaiB/baiF CoA-transferase family protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GSW2_CUPNN
CaiB/baiF CoA-transferase family protein {ECO:0000313|EMBL:AEI81089.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
SCNpilot_cont_1000_p_scaffold_914_28
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25652..26473
DNA (822bp) protein (274aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CAJ96523.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAJ96523.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Enoyl-CoA hydratase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K0F1_CUPNH
SCNpilot_cont_1000_p_scaffold_914_29
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

26470..27639
DNA (1170bp) protein (390aa)
Acetyl-CoA acetyltransferase n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BME0_MYCCN rbh
acetyl-CoA acetyltransferase rbh
Tax=RBG_16_Chloroflexi_64_32_curated
SCNpilot_cont_1000_p_scaffold_914_30
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

27636..28037
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZJP0_9RHOO
hypothetical protein; K07068
Tax=RBG_16_Chloroflexi_64_32_curated
Displaying items 1-30 of 36 in total

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