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SCNpilot_cont_1000_p_scaffold_947

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_947_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(573..830)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VWP1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40125.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_p_scaffold_947_2
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(959..1921)
DNA (963bp) protein (321aa)
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG19631.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AJG19631.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] rbh
Pyridoxal-5'-phosphate-dependent enzyme n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WF45_9BURK
SCNpilot_cont_1000_p_scaffold_947_3
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1918..2826)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUV9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ78492.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_1000_p_scaffold_947_4
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3079..3354)
DNA (276bp) protein (92aa)
Transglycosylase associated protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IBW9_9PSEU
transglycosylase associated protein
Transglycosylase associated protein {ECO:0000313|EMBL:EOD69996.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
SCNpilot_cont_1000_p_scaffold_947_5
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3599..4036
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5U836_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB41894.1}; TaxID=1089454 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae NBRC 100016.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_947_6
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4491..6767
DNA (2277bp) protein (759aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EME17640.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EME17640.1};; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
DNA polymerase III gamma subunit (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] rbh
DNA polymerase III subunits gamma and tau n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2W1Z0_9NOCA rbh
SCNpilot_cont_1000_p_scaffold_947_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6828..7472
DNA (645bp) protein (215aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ12_PSEUX rbh
hypothetical protein rbh
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA27208.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_947_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7459..8322)
DNA (864bp) protein (288aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
Cell wall hydrolase/autolysin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS65_PSEUX rbh
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEA22625.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_947_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8406..8729
DNA (324bp) protein (108aa)
Nucleoid-associated protein Psed_0353 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS66_PSEUX
hypothetical protein; K09747 hypothetical protein
Nucleoid-associated protein Psed_0353 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_947_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8733..9350
DNA (618bp) protein (206aa)
Recombination protein RecR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS67_PSEUX rbh
Recombination protein recR; K06187 recombination protein RecR rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_947_11
unknown

Not on your lists

comp(9361..9525)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_947_12
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9895..10869
DNA (975bp) protein (325aa)
ATPase component of ABC-type dipeptide/oligopeptide/nickel transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8HKG3_AMYMU rbh
dipeptide/oligopeptide/nickel ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEK47596.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_1000_p_scaffold_947_13
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10866..11849
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MR15_SACVD
oligopeptide/dipeptide ABC transporter, ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACU98601.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
SCNpilot_cont_1000_p_scaffold_947_14
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12024..12584
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUS2_ACIC1
Sigma-70 region 2 domain protein {ECO:0000313|EMBL:CCH77817.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
ECF subfamily RNA polymerase sigma-24 factor
SCNpilot_cont_1000_p_scaffold_947_15
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12586..13053
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035D41F6
Uncharacterized protein {ECO:0000313|EMBL:EWM14096.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_947_16
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13119..14453
DNA (1335bp) protein (445aa)
Putative Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EX20_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KGM00773.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
peptidase S8 and S53 subtilisin kexin sedolisin
SCNpilot_cont_1000_p_scaffold_947_17
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14437..17133)
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JU90_SACES rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH31400.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_cont_1000_p_scaffold_947_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17207..19003)
DNA (1797bp) protein (599aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] rbh
2-isopropylmalate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS72_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_947_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19261..19563
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS73_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22633.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_947_20
unknown

Not on your lists

comp(19570..19863)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_947_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20081..20548)
DNA (468bp) protein (156aa)
iorA; isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16); K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
4-hydroxybenzoyl-CoA reductase, gamma subunit n=1 Tax=Streptomyces sp. AA4 RepID=D9VDS3_9ACTO
4-hydroxybenzoyl-CoA reductase, gamma subunit {ECO:0000313|EMBL:EFL10137.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SCNpilot_cont_1000_p_scaffold_947_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20557..22902)
DNA (2346bp) protein (782aa)
iorB; isoquinoline 1-oxidoreductase subunit beta (EC:1.3.99.16); K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16] rbh
isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0003620054 rbh
Isoquinoline 1-oxidoreductase, beta subunit {ECO:0000313|EMBL:EWM17762.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_947_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23392..24657
DNA (1266bp) protein (422aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Aspartokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS75_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_947_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24654..25736
DNA (1083bp) protein (361aa)
aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS76_PSEUX rbh
SCNpilot_cont_1000_p_scaffold_947_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25752..26276
DNA (525bp) protein (175aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS78_PSEUX
Carbonic anhydrase {ECO:0000313|EMBL:AEA22638.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_947_26
unknown

Not on your lists

26384..26566
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_947_27
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26575..27168
DNA (594bp) protein (198aa)
NmrA family protein n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A033_STRMB
NmrA family protein {ECO:0000313|EMBL:EME98388.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
hydroxylase
SCNpilot_cont_1000_p_scaffold_947_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27179..28186)
DNA (1008bp) protein (336aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBF0 rbh
hypothetical protein rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AEA24893.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_947_29
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28203..28946)
DNA (744bp) protein (248aa)
major facilitator superfamily mfs_1 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBEF
major facilitator superfamily protein
Major facilitator superfamily transporter {ECO:0000313|EMBL:EEP73761.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
SCNpilot_cont_1000_p_scaffold_947_30
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29181..30632
DNA (1452bp) protein (484aa)
Catalase n=1 Tax=Frankia sp. QA3 RepID=I9KCE3_9ACTO rbh
Catalase {ECO:0000313|EMBL:EIV91625.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
Displaying items 1-30 of 32 in total

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