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SCNpilot_cont_1000_p_scaffold_968

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_968_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(264..1928)
DNA (1665bp) protein (555aa)
alpha amylase catalytic subunit; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Alpha amylase catalytic region n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2M7_KRIFD rbh
Alpha amylase catalytic region {ECO:0000313|EMBL:ADB30208.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_968_2
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1929..2828)
DNA (900bp) protein (300aa)
sugar ABC transporter permease n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037F1392 rbh
Maltose/maltodextrin ABC transporter, permease protein MalG {ECO:0000313|EMBL:EWC58553.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ABC sugar transporter, permease component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_968_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2825..3835)
DNA (1011bp) protein (337aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q457_KRIFD rbh
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB30371.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_968_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3905..5212)
DNA (1308bp) protein (436aa)
Extracellular solute-binding protein family 1 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q456_KRIFD rbh
extracellular solute-binding protein family 1 protein; K02027 multiple sugar transport system substrate-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADB30370.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_968_5
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5445..6497
DNA (1053bp) protein (351aa)
Transcriptional regulator, LacI family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH16_NAKMY rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CCH80000.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
LacI family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_968_6
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6594..7679
DNA (1086bp) protein (362aa)
Maltose/cellubiose ABC transporter ATP-binding protein n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3CT61_9ACTO rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KES07548.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
ABC transporter ATP-binding protein; K10243 cellobiose transport system ATP-binding protein rbh
SCNpilot_cont_1000_p_scaffold_968_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7814..8854)
DNA (1041bp) protein (347aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS81_PSEUX rbh
GCN5-like N-acetyltransferase rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA22641.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_968_8
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8975..9397
DNA (423bp) protein (141aa)
organic hydroperoxide resistance protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE35B
Organic hydroperoxide resistance protein {ECO:0000313|EMBL:KFZ83977.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
organic hydroperoxide resistance protein
SCNpilot_cont_1000_p_scaffold_968_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9413..11392)
DNA (1980bp) protein (660aa)
Acylaminoacyl-peptidase {ECO:0000313|EMBL:AEA22643.1}; EC=3.4.19.1 {ECO:0000313|EMBL:AEA22643.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Acylaminoacyl-peptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIP8_PSEUX rbh
acylaminoacyl peptidase rbh
SCNpilot_cont_1000_p_scaffold_968_10
unknown

Not on your lists

comp(11506..11625)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_968_11
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11913..12737
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036A4607
Uncharacterized protein {ECO:0000313|EMBL:KJE21828.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
thioesterase superfamily protein
SCNpilot_cont_1000_p_scaffold_968_12
unknown

Not on your lists

comp(12798..12956)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_968_13
unknown

Not on your lists

comp(13081..13479)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_968_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13493..14053)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJ22_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU69164.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_1000_p_scaffold_968_15
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14067..15413)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XFQ6_MICPN rbh
hypothetical protein; K02004 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAK35463.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_cont_1000_p_scaffold_968_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15410..16171)
DNA (762bp) protein (254aa)
macrolide ABC transporter ATP-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B698EF rbh
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK30851.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
SCNpilot_cont_1000_p_scaffold_968_17
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16168..18003)
DNA (1836bp) protein (612aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUW2_ACIC1
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABK53222.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
SCNpilot_cont_1000_p_scaffold_968_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18207..18641
DNA (435bp) protein (145aa)
MerR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF085
molybdenum-pterin-binding protein
Molybdenum-pterin binding protein {ECO:0000313|EMBL:AEA27786.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_968_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18643..19530)
DNA (888bp) protein (296aa)
Putative AraC-type regulator n=1 Tax=uncultured bacterium RepID=H9LCP9_9BACT
Transcriptional regulator AraC {ECO:0000313|EMBL:GAN76470.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative transcriptional regulator
SCNpilot_cont_1000_p_scaffold_968_20
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19711..21339
DNA (1629bp) protein (543aa)
Cyclohexanone monooxygenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D5G3_BRAJP rbh
Cyclohexanone monooxygenase {ECO:0000313|EMBL:KGT79085.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
cyclohexanone monooxygenase rbh
SCNpilot_cont_1000_p_scaffold_968_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21336..22382
DNA (1047bp) protein (349aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
alpha/beta hydrolase fold protein; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] rbh
Homoserine O-acetyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XRP2_9ACTO rbh
SCNpilot_cont_1000_p_scaffold_968_22
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22404..23552)
DNA (1149bp) protein (383aa)
Transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=D9V7A1_9ACTO rbh
Transcriptional regulator {ECO:0000313|EMBL:EFL07294.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_968_23
unknown

Not on your lists

comp(24296..24754)
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_968_24
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24900..25757)
DNA (858bp) protein (286aa)
monooxygenase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035DB6A6 rbh
luciferase-like protein rbh
Luciferase {ECO:0000313|EMBL:KDS83997.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
SCNpilot_cont_1000_p_scaffold_968_25
Streptomyces nanchangensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25849..26418
DNA (570bp) protein (190aa)
TetR family transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI000367F658
TetR-family transcriptional regulator {ECO:0000313|EMBL:ADC45572.1}; TaxID=204925 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nanchangensis.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_968_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26432..27088)
DNA (657bp) protein (219aa)
GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS59_PSEUX rbh
GntR family transcriptional regulator rbh
GntR domain protein {ECO:0000313|EMBL:AEA22619.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_968_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27194..28084
DNA (891bp) protein (297aa)
Ureidoglycolate lyase {ECO:0000313|EMBL:AEA22618.1}; EC=4.3.2.3 {ECO:0000313|EMBL:AEA22618.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Ureidoglycolate lyase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS58_PSEUX rbh
ureidoglycolate lyase rbh
SCNpilot_cont_1000_p_scaffold_968_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28087..28872
DNA (786bp) protein (262aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS57_PSEUX rbh
alpha/beta hydrolase rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA22617.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_968_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28869..30110
DNA (1242bp) protein (414aa)
Amidohydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS56_PSEUX rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:AEA22616.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_968_30
unknown

Not on your lists

30157..30453
DNA (297bp) protein (99aa)

This feature has no annotations

Displaying items 1-30 of 65 in total

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