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SCNpilot_cont_1000_p_scaffold_4832

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4832_1
unknown

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2..580
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4832_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(427..1848)
DNA (1422bp) protein (474aa)
LytTr DNA-binding region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG5_PSEUX rbh
LytTr DNA-binding protein rbh
LytTr DNA-binding region {ECO:0000313|EMBL:AEA27390.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_4832_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2027..3331)
DNA (1305bp) protein (435aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA27389.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEA27389.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Butyryl-CoA dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG4_PSEUX rbh
butyryl-CoA dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_4832_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3407..3883)
DNA (477bp) protein (159aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG3_PSEUX
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AEA27388.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_4832_5
unknown

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4265..4822
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4832_6
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5481..5675
DNA (195bp) protein (65aa)
Transposase, mutator type n=1 Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4TFH0_MYCGI
Transposase, Mutator family protein {ECO:0000313|EMBL:EUA07997.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
transposase, mutator type
SCNpilot_cont_1000_p_scaffold_4832_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5600..5965)
DNA (366bp) protein (122aa)
hypothetical protein n=2 Tax=Salinispora pacifica RepID=UPI000364BC5D
Transposase {ECO:0000313|EMBL:EWM19006.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
transposase IS4 family protein
SCNpilot_cont_1000_p_scaffold_4832_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6690..8024
DNA (1335bp) protein (445aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AEA27391.1}; EC=1.3.99.3 {ECO:0000313|EMBL:AEA27391.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Acyl-CoA dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTG6_PSEUX rbh
acyl-CoA dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_4832_9
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8138..8377
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MG73_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KJJ39237.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Hexameric tyrosine-coordinated heme protein (HTHP)
SCNpilot_cont_1000_p_scaffold_4832_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8426..8581
DNA (156bp) protein (52aa)
superoxide dismutase, Ni; K00518 superoxide dismutase [EC:1.15.1.1]
superoxide dismutase n=1 Tax=Actinopolyspora halophila RepID=UPI0003735754
Superoxide dismutase {ECO:0000313|EMBL:EWM15916.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Displaying 10 items

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