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SCNpilot_cont_1000_p_scaffold_1690

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1690_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76..501)
DNA (426bp) protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTL1_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase; K07032
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA28514.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1690_2
unknown

Not on your lists

comp(890..1111)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1690_3
unknown

Not on your lists

1224..1466
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379EF9
SCNpilot_cont_1000_p_scaffold_1690_4
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1444..2121)
DNA (678bp) protein (226aa)
DNA repair protein RadC n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XQ70_9ACTO
DNA repair protein {ECO:0000313|EMBL:KGN33897.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
SCNpilot_cont_1000_p_scaffold_1690_5
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2201..2830)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036CCE64
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFQ83387.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
major facilitator superfamily multidrug resistance protein
SCNpilot_cont_1000_p_scaffold_1690_6
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2831..3109)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003698698
Putative uncharacterized protein {ECO:0000313|EMBL:GAB17327.1}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
MaoC-like dehydratase
SCNpilot_cont_1000_p_scaffold_1690_7
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3501..4337)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI0003696BFC rbh
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ65969.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1690_8
unknown

Not on your lists

4781..4918
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1690_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4906..5406)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000380FB78
HxlR family transcriptional regulator {ECO:0000313|EMBL:ETK33600.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
HxlR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1690_10
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5465..6265
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6K4V2_STRNV rbh
Uncharacterized protein {ECO:0000313|EMBL:EST26441.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
PEP phosphonomutase-like enzyme
SCNpilot_cont_1000_p_scaffold_1690_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6272..7096
DNA (825bp) protein (275aa)
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVQ8_9ACTO rbh
DNA-(apurinic or apyrimidinic site) lyase rbh
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:AGZ41043.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_p_scaffold_1690_12
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7300..8073)
DNA (774bp) protein (258aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Oxidoreductase n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XE99_9NOCA
Putative oxidoreductase {ECO:0000313|EMBL:GAF49395.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
SCNpilot_cont_1000_p_scaffold_1690_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8070..9086)
DNA (1017bp) protein (339aa)
polysaccharide deacetylase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379BAD rbh
polysaccharide deacetylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_1000_p_scaffold_1690_14
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9196..10395
DNA (1200bp) protein (400aa)
Putative CdaR family transcriptional regulator n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3V7M7_9ACTO rbh
Putative CdaR family transcriptional regulator {ECO:0000313|EMBL:GAC86252.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1690_15
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10382..10711)
DNA (330bp) protein (110aa)
NADP-dependent oxidoreductase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WNM1_9NOCA
NADP-dependent oxidoreductase {ECO:0000313|EMBL:EID77987.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
NADP-dependent oxidoreductase
SCNpilot_cont_1000_p_scaffold_1690_16
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11265..12875
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003614F71 rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EID71909.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
AMP-binding protein rbh
SCNpilot_cont_1000_p_scaffold_1690_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13253..14404)
DNA (1152bp) protein (384aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] rbh
DNA polymerase III, delta prime subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV33_PSEUX rbh
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:AEA28579.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1690_18
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14401..16410)
DNA (2010bp) protein (670aa)
dTMP kinase {ECO:0000256|SAAS:SAAS00031932}; EC=2.7.4.9 {ECO:0000256|SAAS:SAAS00031932};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Permease, MFS-type n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JNR9_SACES rbh
Permease, MFS-type rbh
SCNpilot_cont_1000_p_scaffold_1690_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16480..17010)
DNA (531bp) protein (177aa)
Peptidase C14, caspase catalytic subunit P20 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV34_PSEUX
peptidase C14, caspase catalytic subunit P20
Peptidase C14, caspase catalytic subunit P20 {ECO:0000313|EMBL:AEA28580.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1690_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17070..19388)
DNA (2319bp) protein (773aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEA28581.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEA28581.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Peptidoglycan glycosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV35_PSEUX rbh
peptidoglycan glycosyltransferase rbh
SCNpilot_cont_1000_p_scaffold_1690_21
unknown

Not on your lists

comp(19671..19739)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 21 items

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