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SCNpilot_cont_1000_p_scaffold_1858

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1858_1
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..697
DNA (696bp) protein (232aa)
acetate permease n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003642214
Acetate permease {ECO:0000313|EMBL:KDN20001.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
solute/sodium (Na+) symporter
SCNpilot_cont_1000_p_scaffold_1858_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

938..1708
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR76_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA24513.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1858_3
unknown

Not on your lists

1932..2369
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1858_4
unknown

Not on your lists

2456..2572
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1858_5
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3164..3526)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000372D672
Ubiquitin-associated-domain-containing protein {ECO:0000313|EMBL:KDN22944.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1858_6
unknown

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3701..3868
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1858_7
unknown

Not on your lists

4147..4617
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1858_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4750..5103
DNA (354bp) protein (118aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJZ3_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase; K06996
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA27018.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1858_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5145..5558
DNA (414bp) protein (138aa)
CBS domain containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJW7_PSEUX
CBS domain-containing protein
CBS domain containing protein {ECO:0000313|EMBL:AEA26992.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1858_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5584..5769)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003822B4E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU70479.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_1000_p_scaffold_1858_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5862..6863)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRX7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28421.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1858_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7029..7502
DNA (474bp) protein (158aa)
Heat shock protein Hsp20 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGK3_NAKMY
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ACV78186.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_p_scaffold_1858_13
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7520..8083)
DNA (564bp) protein (188aa)
UspA protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0Y4_MODMB
UspA protein
UspA protein {ECO:0000313|EMBL:CCH89297.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_1000_p_scaffold_1858_14
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8200..9102)
DNA (903bp) protein (301aa)
fbaB; Fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] rbh
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037D4FD4 rbh
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:EME55074.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
SCNpilot_cont_1000_p_scaffold_1858_15
unknown

Not on your lists

9421..9615
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1858_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9724..10158
DNA (435bp) protein (145aa)
Putative signal transduction protein with CBS domains n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR61_PSEUX
signal transduction protein
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:AEA24498.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1858_17
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10155..10949
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Rhodococcus sp. R1101 RepID=UPI000303EC68
Usp family protein {ECO:0000313|EMBL:GAB04361.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
universal stress protein
SCNpilot_cont_1000_p_scaffold_1858_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11016..11636
DNA (621bp) protein (207aa)
Polysaccharide deacetylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS85_PSEUX
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEA22838.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_1858_19
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11973..12545
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000371E23C
DoxX protein {ECO:0000313|EMBL:EKX65802.1}; Flags: Fragment;; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
integral membrane protein
SCNpilot_cont_1000_p_scaffold_1858_20
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12533..13159
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036DC1DD
Uncharacterized protein {ECO:0000313|EMBL:GAM49622.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
abortive infection protein
SCNpilot_cont_1000_p_scaffold_1858_21
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13285..13842
DNA (558bp) protein (186aa)
porC; pyruvate ferredoxin oxidoreductase gamma subunit PorC (EC:1.2.7.1); K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1]
Pyruvate ferredoxin oxidoreductase gamma subunit PorC n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT67_RUBGI
Tax=CG_Rhodof_03
SCNpilot_cont_1000_p_scaffold_1858_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13836..15026
DNA (1191bp) protein (397aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] rbh
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRX5_ACCPU rbh
Pyruvate ferredoxin oxidoreductase, alpha subunit {ECO:0000313|EMBL:EWM10173.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_1858_23
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15029..16024
DNA (996bp) protein (332aa)
thiamine pyrophosphate-binding domain-containing protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] rbh
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2S5_LEPCP rbh
Pyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EWM10172.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_1000_p_scaffold_1858_24
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16024..17643
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000366E5D9 rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EWM10171.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
porD; putative pyruvate ferredoxin oxidoreductase delta subunit PorD rbh
SCNpilot_cont_1000_p_scaffold_1858_25
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17646..18134
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036A2710
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AEV76609.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
Displaying 25 items

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