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SCNpilot_cont_1000_p_scaffold_1022

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1022_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1768)
DNA (1767bp) protein (589aa)
UPI0003CDE266 related cluster n=1 Tax=unknown RepID=UPI0003CDE266 rbh
Transporter {ECO:0000313|EMBL:ESY69925.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
multidrug efflux membrane fusion protein MexF; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
SCNpilot_cont_1000_p_scaffold_1022_2
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1762..2016)
DNA (255bp) protein (85aa)
UPI0003CFA4F2 related cluster n=1 Tax=unknown RepID=UPI0003CFA4F2
Uncharacterized protein {ECO:0000313|EMBL:ESZ29919.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1022_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2260..2850
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YD07_MESOW rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEH90114.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_p_scaffold_1022_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3187..4221)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7I5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV12266.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein; K02529 LacI family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_1022_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4320..5114)
DNA (795bp) protein (265aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YD05_MESOW rbh
ABC transporter related protein {ECO:0000313|EMBL:AEH90112.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_p_scaffold_1022_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5119..6138)
DNA (1020bp) protein (340aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YD04_MESOW rbh
inner-membrane translocator rbh
ABC transporter permease protein {ECO:0000313|EMBL:BAB53486.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_p_scaffold_1022_7
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6247..7179)
DNA (933bp) protein (311aa)
UPI0003CE33DF related cluster n=1 Tax=unknown RepID=UPI0003CE33DF rbh
ABC transporter binding protein rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY69919.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_1000_p_scaffold_1022_8
Trichoderma virens, Trichoderma, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

7453..8532
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Hypocrea virens (strain Gv29-8 / FGSC 10586) RepID=G9MT82_HYPVG rbh
Uncharacterized protein {ECO:0000313|EMBL:EHK23124.1}; TaxID=413071 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma.;" source="Hypocrea virens (strain Gv29-8 / FGSC 10586) (Gliocladium virens); (Trichoderma virens).;"
oxidoreductase-like protein rbh
SCNpilot_cont_1000_p_scaffold_1022_9
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8529..9632
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D7AA6 rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ABR60871.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_1000_p_scaffold_1022_10
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9704..10690)
DNA (987bp) protein (329aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDW2_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDX27572.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_1022_11
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10687..11661)
DNA (975bp) protein (325aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBJ4_MESOW rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AEH87741.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_p_scaffold_1022_12
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11658..13301)
DNA (1644bp) protein (548aa)
ribose ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter related protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFH7_9RHIZ rbh
ABC transporter related protein {ECO:0000313|EMBL:CCV10774.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_1000_p_scaffold_1022_13
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13328..14359)
DNA (1032bp) protein (344aa)
Ribose binding protein of ABC transporter n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBJ6_MESOW rbh
ribose binding protein of ABC transporter rbh
Ribose binding protein of ABC transporter {ECO:0000313|EMBL:AEH87743.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_p_scaffold_1022_14
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14406..15587)
DNA (1182bp) protein (394aa)
UPI0003CFCA33 related cluster n=1 Tax=unknown RepID=UPI0003CFCA33
Oxidoreductase {ECO:0000313|EMBL:ESZ45398.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
oxidoreductase domain-containing protein
SCNpilot_cont_1000_p_scaffold_1022_15
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15783..17309)
DNA (1527bp) protein (509aa)
D-mannonate oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00036D250A
Mannitol dehydrogenase Rossmann domain protein {ECO:0000313|EMBL:AID31253.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
mannitol-1-phosphate/altronate dehydrogenase
SCNpilot_cont_1000_p_scaffold_1022_16
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17313..18107)
DNA (795bp) protein (265aa)
UPI0003CEC412 related cluster n=1 Tax=unknown RepID=UPI0003CEC412 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ESW93956.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_cont_1000_p_scaffold_1022_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18191..19042)
DNA (852bp) protein (284aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P3M0_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI74759.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_1000_p_scaffold_1022_18
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19210..19683)
DNA (474bp) protein (158aa)
UPI0003CEF62A related cluster n=1 Tax=unknown RepID=UPI0003CEF62A
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESW78967.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
AsnC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1022_19
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19813..22203
DNA (2391bp) protein (797aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
putative transketolase; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
UPI0003CEC774 related cluster n=1 Tax=unknown RepID=UPI0003CEC774 rbh
SCNpilot_cont_1000_p_scaffold_1022_20
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22209..23048)
DNA (840bp) protein (280aa)
Short-chain dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTR7_9RHIZ rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ESX83097.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_p_scaffold_1022_21
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23045..23956)
DNA (912bp) protein (304aa)
SMP-30/Gluconolaconase/LRE-like region-containing protein; K01053 gluconolactonase [EC:3.1.1.17]
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUM8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX83377.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_1000_p_scaffold_1022_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23953..24786)
DNA (834bp) protein (278aa)
ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FR14_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:ESX83098.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
SCNpilot_cont_1000_p_scaffold_1022_23
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24783..25727)
DNA (945bp) protein (315aa)
Sugar ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTH5_9RHIZ rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:ESX83099.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_1000_p_scaffold_1022_24
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25742..27178)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRV6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX83378.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_1000_p_scaffold_1022_25
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27465..28262
DNA (798bp) protein (266aa)
Short-chain dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUC0_9RHIZ rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ESX83100.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_p_scaffold_1022_26
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28268..29287
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUE2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX83379.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1022_27
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29337..30548)
DNA (1212bp) protein (404aa)
Dehydratase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FR69_9RHIZ rbh
Dehydratase {ECO:0000313|EMBL:ESX83101.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
dehydratase/racemase; K14470 mesaconyl-CoA C1-C4 CoA transferase rbh
SCNpilot_cont_1000_p_scaffold_1022_28
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30545..31561)
DNA (1017bp) protein (339aa)
Acyl dehydratase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTS2_9RHIZ rbh
Acyl dehydratase {ECO:0000313|EMBL:ESX83102.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
acyl dehydratase-like protein rbh
SCNpilot_cont_1000_p_scaffold_1022_29
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31586..31870)
DNA (285bp) protein (95aa)
Muconolactone Delta-isomerase {ECO:0000256|PIRNR:PIRNR001486}; Short=MIase {ECO:0000256|PIRNR:PIRNR001486};; EC=5.3.3.4 {ECO:0000256|PIRNR:PIRNR001486};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Muconolactone delta-isomerase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FR18_9RHIZ
methylmuconolactone isomerase
SCNpilot_cont_1000_p_scaffold_1022_30
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31849..32883)
DNA (1035bp) protein (345aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTI0_9RHIZ rbh
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha {ECO:0000313|EMBL:ESX83104.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Displaying items 1-30 of 42 in total

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