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SCNpilot_cont_1000_p_scaffold_745

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_745_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

452..2716
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETJ2_AMOA5
hypothetical protein; K07126
Uncharacterized protein {ECO:0000313|EMBL:ACE06544.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2820..4775
DNA (1956bp) protein (652aa)
hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] rbh
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU75_AMOA5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05494.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4923..8231
DNA (3309bp) protein (1103aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESK8_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06210.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8414..10681
DNA (2268bp) protein (756aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
UvrD/REP helicase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU74_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_745_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10738..11382
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU73_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05492.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11388..12701
DNA (1314bp) protein (438aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU72_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_745_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12821..13363)
DNA (543bp) protein (181aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] rbh
ATP-dependent protease subunit HslV {ECO:0000255|HAMAP-Rule:MF_00248}; EC=3.4.25.2 {ECO:0000255|HAMAP-Rule:MF_00248};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
ATP-dependent protease subunit HslV n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=HSLV_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_745_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13592..14956)
DNA (1365bp) protein (455aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] rbh
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU67_AMOA5 rbh
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ACE05486.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14919..17663)
DNA (2745bp) protein (915aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU66_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05485.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17682..18755)
DNA (1074bp) protein (358aa)
Permease YjgP/YjgQ family protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU65_AMOA5 rbh
permease YjgP/YjgQ family protein rbh
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ACE05484.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19343..20467)
DNA (1125bp) protein (375aa)
queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] rbh
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU64_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_745_12
unknown

Not on your lists

comp(20711..21166)
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_745_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21281..23074)
DNA (1794bp) protein (598aa)
UvrABC system protein C n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU62_AMOA5 rbh
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23657..25411)
DNA (1755bp) protein (585aa)
hypothetical protein; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] rbh
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4B9_AMOA5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACP20836.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25666..26637)
DNA (972bp) protein (324aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] rbh
Ppx/GppA phosphatase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU60_AMOA5 rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:ACE05479.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26694..27650)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU59_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05478.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27708..28556)
DNA (849bp) protein (283aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] rbh
Modification methylase, HemK family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU58_AMOA5 rbh
Modification methylase, HemK family {ECO:0000313|EMBL:ACE05477.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28864..29676
DNA (813bp) protein (271aa)
Appr-1-p processing domain protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU57_AMOA5 rbh
Appr-1-p processing domain-containing protein rbh
Appr-1-p processing domain protein {ECO:0000313|EMBL:ACE05476.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29972..30667)
DNA (696bp) protein (232aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] rbh
Lipoprotein signal peptidase {ECO:0000255|HAMAP-Rule:MF_00161}; EC=3.4.23.36 {ECO:0000255|HAMAP-Rule:MF_00161};; Prolipoprotein signal peptidase {ECO:0000255|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000255|HAMAP-Rule:MF_00161}; Short=SPase II {ECO:0000255|HAMAP-Rule:MF_00161};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Lipoprotein signal peptidase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=LSPA_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_745_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30751..31887)
DNA (1137bp) protein (379aa)
aminotransferase class V; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Aminotransferase class V n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU55_AMOA5 rbh
Aminotransferase class V {ECO:0000313|EMBL:ACE05474.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31892..33286)
DNA (1395bp) protein (465aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; K01840 phosphomannomutase [EC:5.4.2.8] rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU54_AMOA5 rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ACE05473.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_22
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33772..36042
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETA9_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06461.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_23
unknown

Not on your lists

36180..36269
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_745_24
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36408..37352)
DNA (945bp) protein (315aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Thioredoxin reductase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU53_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_745_25
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37363..38226)
DNA (864bp) protein (288aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU52_AMOA5 rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACE05471.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_745_26
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38534..40672)
DNA (2139bp) protein (713aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] rbh
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase {ECO:0000255|HAMAP-Rule:MF_01595};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=PNP_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_745_27
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(40848..41123)
DNA (276bp) protein (92aa)
30S ribosomal protein S15 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS15_AMOA5
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 27 items

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