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SCNpilot_cont_1000_p_scaffold_3921

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3921_1
unknown

Not on your lists

comp(179..364)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3921_2
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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485..1765
DNA (1281bp) protein (427aa)
Ankyrin n=1 Tax=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) RepID=C3NIT9_SULIN
ankyrin
Ankyrin {ECO:0000313|EMBL:ACP49049.1}; TaxID=419942 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2).;"
SCNpilot_cont_1000_p_scaffold_3921_3
unknown

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comp(2318..2461)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3921_4
Capnocytophaga sp. oral taxon 863, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2484..2792)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 863 str. F0517 RepID=U2C1U8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ERI63197.1}; TaxID=1227266 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;"
SCNpilot_cont_1000_p_scaffold_3921_5
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

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comp(2789..8344)
DNA (5556bp) protein (1852aa)
hypothetical protein, partial n=1 Tax=Pseudoalteromonas flavipulchra RepID=UPI00029AD5EC
Chromosome undetermined scaffold_97, whole genome shotgun sequence {ECO:0000313|EMBL:CAK94864.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium.;" source="Paramecium tetraurelia.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3921_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9173..9979)
DNA (807bp) protein (269aa)
enoyl-(acyl-carrier-protein) reductase; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU92_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_3921_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10267..10887
DNA (621bp) protein (207aa)
methyladenine glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
Methyladenine glycosylase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU91_AMOA5
Methyladenine glycosylase {ECO:0000313|EMBL:ACE05510.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11179..11982
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU90_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05509.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12051..12734
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4C2_AMOA5 rbh
hypothetical protein; K03561 biopolymer transport protein ExbB rbh
Uncharacterized protein {ECO:0000313|EMBL:ACP20839.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12724..13113
DNA (390bp) protein (130aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU88_AMOA5
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACE05507.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13116..13802
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU87_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05506.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_12
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


14438..14887
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU86_AMOA5
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


14892..15278
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS9_AMOA5
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


15232..16386
DNA (1155bp) protein (385aa)
30S ribosomal protein S2 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS2_AMOA5 rbh
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 rbh
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16492..17211
DNA (720bp) protein (240aa)
Elongation factor Ts n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=EFTS_AMOA5 rbh
translation elongation factor Ts; K02357 elongation factor Ts rbh
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_16
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17516..18034)
DNA (519bp) protein (173aa)
Transposase Tn3 family protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SPT2_9CYAN
transposase Tn3 family protein
Transposase Tn3 family protein {ECO:0000313|EMBL:AFY71986.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
SCNpilot_cont_1000_p_scaffold_3921_17
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18280..18981)
DNA (702bp) protein (234aa)
Transposase Tn3 family protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SPT2_9CYAN
transposase Tn3 family protein
Transposase Tn3 family protein {ECO:0000313|EMBL:AFY71986.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
SCNpilot_cont_1000_p_scaffold_3921_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19403..19735
DNA (333bp) protein (111aa)
DNA invertase n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000345E42F
resolvase domain-containing protein
Resolvase domain {ECO:0000313|EMBL:ACE05544.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_3921_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19886..21529
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESM2_AMOA5
hypothetical protein; K07126
Uncharacterized protein {ECO:0000313|EMBL:ACE06544.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 19 items

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