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SCNpilot_cont_1000_p_scaffold_1391

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1391_1
unknown

Not on your lists

2..166
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1391_2
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(300..767)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Gillisia marina RepID=UPI00029A2D1A
Contig31, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77674.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1391_3
CG_Verruco_01, Verrucomicrobia, Bacteria

Not on your lists

comp(800..1612)
DNA (813bp) protein (271aa)
3-beta-hydroxysteroid dehydrogenase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYE9_PARAV rbh
3-beta-hydroxysteroid dehydrogenase rbh
Tax=CG_Verruco_01
SCNpilot_cont_1000_p_scaffold_1391_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1974..5156
DNA (3183bp) protein (1061aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESX2_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06324.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5384..8794
DNA (3411bp) protein (1137aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESX2_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06324.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8781..12125
DNA (3345bp) protein (1115aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESX2_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06321.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1391_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12248..12925)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESX2_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06324.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1391_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12990..19541)
DNA (6552bp) protein (2184aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESX2_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06324.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_9
unknown

Not on your lists

comp(20229..20543)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1391_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20494..20886)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LRT7_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33067.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
SCNpilot_cont_1000_p_scaffold_1391_11
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20893..21576)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XUR6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY53777.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1391_12
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21656..22225)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERT2_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05934.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22570..24228)
DNA (1659bp) protein (553aa)
hypothetical protein; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET19_AMOA5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06371.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24330..25937)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET20_AMOA5 rbh
hypothetical protein; K06158 ATP-binding cassette, subfamily F, member 3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06372.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26089..26577)
DNA (489bp) protein (163aa)
hypothetical protein; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET21_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06373.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26613..27194)
DNA (582bp) protein (194aa)
hypothetical protein; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET22_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06374.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27219..28274)
DNA (1056bp) protein (352aa)
hypothetical protein; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
NADH-quinone oxidoreductase subunit H n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET23_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_1391_18
Coxiella burnetii, Coxiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28331..28603)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Coxiella burnetii (strain Dugway 5J108-111) RepID=A9KFD8_COXBN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS78524.1}; TaxID=434922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella.;" source="Coxiella burnetii (strain Dugway 5J108-111).;"
SCNpilot_cont_1000_p_scaffold_1391_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28638..28874)
DNA (237bp) protein (79aa)
hypothetical protein; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET24_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06376.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29000..29752)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET25_AMOA5 rbh
hypothetical protein; K02065 putative ABC transport system ATP-binding protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06377.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29770..30522)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET26_AMOA5 rbh
hypothetical protein; K02066 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06378.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_22
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30726..32027)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET27_AMOA5 rbh
hypothetical protein; K11708 manganese/zinc/iron transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06379.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_23
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32177..32971)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET29_AMOA5 rbh
hypothetical protein; K11710 manganese/zinc/iron transport system ATP- binding protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06381.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_24
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32973..33890)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L415_AMOA5 rbh
hypothetical protein; K11707 manganese/zinc/iron transport system substrate-binding protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACP21056.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_25
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33884..34543)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET31_AMOA5 rbh
hypothetical protein; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06383.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_26
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35143..35994
DNA (852bp) protein (284aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] rbh
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET32_AMOA5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06384.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1391_27
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36188..37381
DNA (1194bp) protein (398aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] rbh
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4L2_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_1391_28
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37616..38020
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ES90_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02543.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_1000_p_scaffold_1391_29
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

38357..40708
DNA (2352bp) protein (784aa)
Uncharacterized protein (Fragment) n=1 Tax=Strongylocentrotus purpuratus RepID=H3HRW7_STRPU
ankyrin repeat protein; K15502 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAY17199.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
SCNpilot_cont_1000_p_scaffold_1391_30
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

41439..44042
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET38_AMOA5 rbh
hypothetical protein; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying items 1-30 of 33 in total

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