ggKbase home page

SCNpilot_cont_1000_p_scaffold_1819

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1819_1
unknown

Not on your lists

2..196
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1819_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(450..6017)
DNA (5568bp) protein (1856aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESW9_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:ACE06321.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1819_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6221..7315)
DNA (1095bp) protein (365aa)
nucleotidyl transferase; K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] rbh
Nucleotidyl transferase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUE7_AMOA5 rbh
Nucleotidyl transferase {ECO:0000313|EMBL:ACE05566.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7332..8828)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUE8_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05567.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9554..12754
DNA (3201bp) protein (1067aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESK8_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06210.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12837..13349)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUE9_AMOA5
hypothetical protein; K06925 UPF0079 ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05568.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_7
unknown

Not on your lists

13557..13736
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1819_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(14072..14377)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS10_AMOA5
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14389..16518)
DNA (2130bp) protein (710aa)
Elongation factor G n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=EFG_AMOA5 rbh
elongation factor G; K02355 elongation factor G rbh
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(16521..16988)
DNA (468bp) protein (156aa)
30S ribosomal protein S7 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS7_AMOA5
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_11
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(17016..17420)
DNA (405bp) protein (135aa)
30S ribosomal protein S12 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS12_AMOA5
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_12
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18439..18717)
DNA (279bp) protein (93aa)
ISSod6 transposase, IS1301 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUF7_AMOA5
ISSod6 transposase
ISSod6 transposase, IS1301 {ECO:0000313|EMBL:ACE05576.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_13
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18786..19382
DNA (597bp) protein (199aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUF8_AMOA5
phospholipase D/Transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ACE05577.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_14
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19446..22601)
DNA (3156bp) protein (1052aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETV2_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06654.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22895..23620
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUG4_AMOA5 rbh
hypothetical protein; K07501 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05583.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_16
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23782..25017
DNA (1236bp) protein (412aa)
Transcription termination factor NusA n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUG5_AMOA5 rbh
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_17
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25032..27683
DNA (2652bp) protein (884aa)
Translation initiation factor IF-2 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=IF2_AMOA5 rbh
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 rbh
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_18
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28542..28739
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RS21_AMOA5
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_19
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28942..29820
DNA (879bp) protein (293aa)
Tyrosine recombinase XerC n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUG9_AMOA5 rbh
integrase family protein; K03733 integrase/recombinase XerC rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29905..31203)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERB6_AMOA5 rbh
hypothetical protein; K07478 putative ATPase rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE05768.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_21
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31388..31753)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETJ0_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06542.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_22
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31750..32007)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETJ1_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06543.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_1819_23
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33186..33647
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERP9_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05901.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 23 items

View Taxonomy