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SCNpilot_cont_1000_p_scaffold_5225

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5225_1
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1..1182
DNA (1182bp) protein (394aa)
Leucine rich repeat protein n=1 Tax=Leptospira interrogans serovar Medanensis str. UT053 RepID=M6QM90_LEPIR
Leucine-rich repeat protein SHOC-2 {ECO:0000313|EMBL:KIC71815.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
leucine-rich repeat protein
SCNpilot_cont_1000_p_scaffold_5225_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1451..1870)
DNA (420bp) protein (140aa)
50S ribosomal protein L19 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RL19_AMOA5
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_5225_3
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1938..3725
DNA (1788bp) protein (596aa)
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP-Rule:MF_00071}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Elongation factor 4 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=LEPA_AMOA5 rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA rbh
SCNpilot_cont_1000_p_scaffold_5225_4
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3777..4664
DNA (888bp) protein (296aa)
hypothetical protein; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] rbh
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includes:; Methenyltetrahydrofolate cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=3.5.4.9 {ECO:0000255|HAMAP-Rule:MF_01576};; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Bifunctional protein FolD n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=FOLD_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_5225_5
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4753..5157)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EST9_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06291.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_5225_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5249..6757)
DNA (1509bp) protein (503aa)
F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
ATP synthase subunit beta n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=ATPB_AMOA5 rbh
SCNpilot_cont_1000_p_scaffold_5225_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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7158..7718
DNA (561bp) protein (187aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401, ECO:0000256|SAAS:SAAS00005567};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQ92_9BACT
methionine-S-sulfoxide reductase
SCNpilot_cont_1000_p_scaffold_5225_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8261..8839
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EST7_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06289.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_5225_9
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8869..10617)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EST6_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06288.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_5225_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10816..12189)
DNA (1374bp) protein (458aa)
Cyclin domain protein F-box protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUE1_AMOA5
cyclin domain-containing protein
Cyclin domain protein F-box protein {ECO:0000313|EMBL:ACE05560.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 10 items

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