name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_978_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..1590)
|
UBA/THIF-type NAD/FAD binding fold protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC39_NITMU
rbh
UBA/THIF-type NAD/FAD binding domain-containing protein
rbh
UBA/THIF-type NAD/FAD binding fold protein {ECO:0000313|EMBL:ABB73682.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_978_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1899..2672)
|
Possible long-chain N-acyl amino acid synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ92_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50548.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
long-chain N-acyl amino acid synthase
|
|
SCNpilot_cont_1000_p_scaffold_978_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3086..3868)
|
Inositol-1-monophosphatase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHK6_9PROT
rbh
Inositol monophosphatase {ECO:0000313|EMBL:KIO50469.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_978_4
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3872..4429)
|
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC35_NITMU
rbh
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AKH38355.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4738..5412
|
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJV4_9PROT
|
|
SCNpilot_cont_1000_p_scaffold_978_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5492..6847
|
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Amino-acid acetyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTV0_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_7
unknown
|
Not on your lists |
comp(6800..6925)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_978_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6964..7236
|
Probable Fe(2+)-trafficking protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHK9_9PROT
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_978_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7333..9414
|
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Polyphosphate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJC9_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9538..11088
|
Adenylate cyclase {ECO:0000313|EMBL:CCU62788.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CCU62788.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Adenylate cyclase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJV8_9PROT
rbh
adenylate cyclase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11209..12273)
|
Fructose-bisphosphate aldolase class II {ECO:0000313|EMBL:CCU62789.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CCU62789.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
rbh
Fructose-bisphosphate aldolase class II n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ97_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12364..13818)
|
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Pyruvate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTV5_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13863..15041)
|
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Phosphoglycerate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL2_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15178..16176)
|
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160, ECO:0000313|EMBL:KIO50460.1}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
rbh
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJD1_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16246..18261)
|
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Transketolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW2_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18560..19663)
|
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJA1_9PROT
rbh
Nitrogen assimilation regulatory protein NtrX {ECO:0000313|EMBL:KIO50458.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
two component sigma-54 specific Fis family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19778..21946)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Nitrogen regulation protein NtrY n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTV9_9PROT
rbh
multi-sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21943..22563)
|
Probable proline rich signal peptide protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL5_9PROT
Proline rich signal peptide protein {ECO:0000313|EMBL:KIO50547.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
proline rich signal peptide protein
|
|
SCNpilot_cont_1000_p_scaffold_978_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22541..23827)
|
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJD5_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23806..24771)
|
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Methionyl-tRNA formyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=FMT_NITMU
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24892..25395)
|
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Peptide deformylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC19_NITMU
|
|
SCNpilot_cont_1000_p_scaffold_978_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25779..26864
|
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJD9_9PROT
rbh
DNA-binding protein {ECO:0000313|EMBL:KIO50454.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
DNA processing protein DprA; K04096 DNA processing protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27093..29624
|
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DNA topoisomerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJA7_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29721..29975)
|
Acyl carrier protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC16_NITMU
phosphopantetheine-binding
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_978_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29991..31211)
|
3-oxoacyl-[acyl-carrier-protein] synthase, KASII n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHM3_9PROT
rbh
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:KIO50452.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
beta-ketoacyl synthase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31391..31645)
|
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC14_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73707.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_978_27
unknown
|
Not on your lists |
comp(31939..32154)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_978_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32233..33375
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJE1_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62807.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33385..34236
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJB1_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62809.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_978_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34223..35287
|
FIG000906: Predicted Permease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHM5_9PROT
rbh
Permease {ECO:0000313|EMBL:KIO50446.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein
rbh
|