name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_2318_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..600
|
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU5_9PROT
|
|
SCNpilot_cont_1000_p_scaffold_2318_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
609..1715
|
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
rbh
Queuine tRNA-ribosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=TGT_NITMU
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1750..2085
|
Preprotein translocase subunit YajC (TC 3.A.5.1.1) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLY2_9PROT
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KIO49312.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
|
|
SCNpilot_cont_1000_p_scaffold_2318_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2161..4005
|
Protein translocase subunit SecD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL92_9PROT
rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4121..5053
|
Protein-export membrane protein SecF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU1_9PROT
rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5158..5838
|
DedA protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWT1_9PROT
rbh
DedA protein {ECO:0000313|EMBL:CCU63700.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K03975 membrane-associated protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5999..7099)
|
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Ferrochelatase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL63_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7295..8314)
|
Heat-inducible transcription repressor hrcA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLX8_9PROT
rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8617..9504
|
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJT5_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9471..11174
|
DNA repair protein RecN n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWS4_9PROT
rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N)
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11234..11803)
|
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
GTP cyclohydrolase 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLX4_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12065..12886
|
Exodeoxyribonuclease III {ECO:0000313|EMBL:CCU63691.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CCU63691.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Exodeoxyribonuclease III n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJS9_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12951..13685)
|
Transcriptional regulator, LuxR family n=2 Tax=Nitrosospira multiformis RepID=Q2Y6B5_NITMU
rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIO49301.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
LuxR family transcriptional regulator; K07782 LuxR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_14
unknown
|
Not on your lists |
13853..13963
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_2318_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14103..15143)
|
Regulatory protein, RpfE type n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLX1_9PROT
rbh
Regulatory protein, RpfE type {ECO:0000313|EMBL:CCU63688.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15289..16668)
|
TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL81_9PROT
rbh
TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex {ECO:0000313|EMBL:CCU63687.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
peptidase U62, modulator of DNA gyrase; K03592 PmbA protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2318_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16784..17185
|
UPF0307 protein NE2194 n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Y2194_NITEU
Uncharacterized protein {ECO:0000313|EMBL:KIO49298.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K09889 ribosome-associated protein
|
|
SCNpilot_cont_1000_p_scaffold_2318_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17212..17964)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLW7_9PROT
rbh
Transglutaminase {ECO:0000313|EMBL:KIO49297.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
transglutaminase-like protein
rbh
|