ggKbase home page

SCNpilot_cont_1000_p_scaffold_4228

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4228_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..995)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFM6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61174.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4228_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1300..1656
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIR6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62527.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4228_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1775..2356)
DNA (582bp) protein (194aa)
Thiopurine S-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626}; EC=2.1.1.67 {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626};; Thiopurine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
thiopurine S-methyltransferase (EC:2.1.1.67); K00569 thiopurine S-methyltransferase [EC:2.1.1.67]
Thiopurine S-methyltransferase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQZ6_SIDLE
SCNpilot_cont_1000_p_scaffold_4228_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2438..3406)
DNA (969bp) protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48403.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_4228_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3932..4942
DNA (1011bp) protein (337aa)
D-lactate dehydrogenase {ECO:0000313|EMBL:CCU62529.1}; EC=1.1.1.28 {ECO:0000313|EMBL:CCU62529.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K03778 D-lactate dehydrogenase [EC:1.1.1.28] rbh
D-lactate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIM7_9PROT rbh
SCNpilot_cont_1000_p_scaffold_4228_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5177..5569
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSS3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62450.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4228_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5837..6565
DNA (729bp) protein (243aa)
aldose 1-epimerase; K01792 glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
Aldose 1-epimerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIY6_9PROT
Aldose 1-epimerase {ECO:0000313|EMBL:CCU62448.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_1000_p_scaffold_4228_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6617..6991)
DNA (375bp) protein (125aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJM4_9PROT
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_cont_1000_p_scaffold_4228_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7237..8943
DNA (1707bp) protein (569aa)
Flagellar M-ring protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJP8_9PROT rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
fliF; flagellar MS-ring protein; K02409 flagellar M-ring protein FliF rbh
SCNpilot_cont_1000_p_scaffold_4228_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8936..9934
DNA (999bp) protein (333aa)
Flagellar motor switch protein FliG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHY2_9PROT rbh
Flagellar motor switch protein G {ECO:0000313|EMBL:KIO48062.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG rbh
SCNpilot_cont_1000_p_scaffold_4228_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10004..10681
DNA (678bp) protein (226aa)
Flagellar assembly protein FliH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUB4_9PROT
Flagellar assembly protein FliH {ECO:0000313|EMBL:CCU62975.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
flagellar assembly protein FliH; K02411 flagellar assembly protein FliH
SCNpilot_cont_1000_p_scaffold_4228_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10684..12102
DNA (1419bp) protein (473aa)
ATPase FliI/YscN (EC:3.6.3.15); K02412 flagellum-specific ATP synthase [EC:3.6.3.14] rbh
Flagellum-specific ATP synthase FliI n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJM0_9PROT rbh
Flagellum-specific ATP synthase FliI {ECO:0000313|EMBL:CCU62974.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_1000_p_scaffold_4228_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12196..12612
DNA (417bp) protein (139aa)
Flagellar protein FliJ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK84_9PROT
Flagellar protein FliJ {ECO:0000313|EMBL:CCU62973.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
flagellar biosynthesis chaperone FliJ-like protein; K02413 flagellar FliJ protein
SCNpilot_cont_1000_p_scaffold_4228_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12681..14192
DNA (1512bp) protein (504aa)
Flagellar hook-length control protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJP4_9PROT
Flagellar hook-length control protein {ECO:0000313|EMBL:CCU62972.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
flagellar hook-length control FliK family protein
SCNpilot_cont_1000_p_scaffold_4228_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14452..14952
DNA (501bp) protein (167aa)
Flagellar biosynthesis protein FliL n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJL7_9PROT
Flagellar biosynthesis protein FliL {ECO:0000313|EMBL:CCU62969.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
fliL; flagellar basal body-associated protein FliL; K02415 flagellar FliL protein
SCNpilot_cont_1000_p_scaffold_4228_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14960..15784
DNA (825bp) protein (275aa)
Flagellar motor switch protein FliM n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK81_9PROT
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KIO48068.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM
Displaying 16 items

View Taxonomy